Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:116693583-116730104

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Prdx1 4 116685599 to 116700000 14401 + protein coding gene peroxiredoxin 1
Tssr38561 4 116693719 to 116693745 26 + TSS region transcription start site region 38561
Tssr38562 4 116693817 to 116693855 38 + TSS region transcription start site region 38562
Tssr38563 4 116693947 to 116693960 13 + TSS region transcription start site region 38563
Tssr38564 4 116694080 to 116694095 15 + TSS region transcription start site region 38564
Tssr38565 4 116694111 to 116694128 17 + TSS region transcription start site region 38565
Tssr38566 4 116696019 to 116696047 28 + TSS region transcription start site region 38566
9530001N24Rik 4 116697076 to 116697506 430 unclassified gene RIKEN cDNA 9530001N24 gene
Tssr38567 4 116699161 to 116699182 21 + TSS region transcription start site region 38567
Tssr38568 4 116699219 to 116699317 98 + TSS region transcription start site region 38568
Tssr38569 4 116699387 to 116699455 68 + TSS region transcription start site region 38569
Tssr164686 4 116699509 to 116699513 4 - TSS region transcription start site region 164686
Tssr38570 4 116700032 to 116700037 5 + TSS region transcription start site region 38570
Tssr38571 4 116701823 to 116701836 13 + TSS region transcription start site region 38571
Mmachc 4 116702434 to 116708385 5951 - protein coding gene methylmalonic aciduria cblC type, with homocystinuria
Tssr38572 4 116708122 to 116708133 11 + TSS region transcription start site region 38572
4930565M07Rik 4 116708124 to 116708431 307 unclassified gene RIKEN cDNA 4930565M07 gene
Cpgi14639 4 116708145 to 116708776 631 CpG island CpG island 14639
Tssr42924 4 116708262 to 116708269 7 - TSS region transcription start site region 42924
Tssr42925 4 116708312 to 116708356 44 - TSS region transcription start site region 42925
Tssr38573 4 116708467 to 116708472 5 + TSS region transcription start site region 38573
Tssr42926 4 116708540 to 116708555 15 - TSS region transcription start site region 42926
Tssr38574 4 116708575 to 116708584 9 + TSS region transcription start site region 38574
Ccdc163 4 116708583 to 116715104 6521 + protein coding gene coiled-coil domain containing 163
Tssr38575 4 116708587 to 116708604 17 + TSS region transcription start site region 38575
Tssr38576 4 116708624 to 116708635 11 + TSS region transcription start site region 38576
Tssr38577 4 116708687 to 116708696 9 + TSS region transcription start site region 38577
Tssr38578 4 116708701 to 116708712 11 + TSS region transcription start site region 38578
Tssr38579 4 116709234 to 116709239 5 + TSS region transcription start site region 38579
Tssr38580 4 116711901 to 116711905 4 + TSS region transcription start site region 38580
Cpgi14640 4 116720794 to 116721440 646 CpG island CpG island 14640
Tesk2 4 116720907 to 116804248 83341 + protein coding gene testis-specific kinase 2
Tssr38581 4 116720920 to 116721004 84 + TSS region transcription start site region 38581
Tssr38582 4 116721067 to 116721078 11 + TSS region transcription start site region 38582
Gm27688 4 116725899 to 116725989 90 + unclassified non-coding RNA gene predicted gene, 27688