Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:116645899-116805989

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Akr1a1 4 116636510 to 116651674 15164 - protein coding gene aldo-keto reductase family 1, member A1 (aldehyde reductase)
Tssr38538 4 116649807 to 116649849 42 + TSS region transcription start site region 38538
Tssr42908 4 116650467 to 116650487 20 - TSS region transcription start site region 42908
Cpgi14637 4 116651087 to 116651707 620 CpG island CpG island 14637
Tssr42909 4 116651389 to 116651409 20 - TSS region transcription start site region 42909
Tssr42910 4 116651419 to 116651426 7 - TSS region transcription start site region 42910
Tssr42911 4 116651435 to 116651446 11 - TSS region transcription start site region 42911
Tssr38539 4 116651508 to 116651535 27 + TSS region transcription start site region 38539
Tssr42912 4 116651541 to 116651549 8 - TSS region transcription start site region 42912
Tssr42913 4 116651566 to 116651571 5 - TSS region transcription start site region 42913
Tssr42914 4 116651596 to 116651636 40 - TSS region transcription start site region 42914
Tssr42915 4 116651644 to 116651665 21 - TSS region transcription start site region 42915
Tssr42916 4 116651677 to 116651682 5 - TSS region transcription start site region 42916
Tssr42917 4 116659552 to 116659560 8 - TSS region transcription start site region 42917
Tssr42918 4 116666769 to 116666784 15 - TSS region transcription start site region 42918
Tssr38540 4 116668486 to 116668505 19 + TSS region transcription start site region 38540
Gm25137 4 116674153 to 116674262 109 + snRNA gene predicted gene, 25137
Tssr38541 4 116674986 to 116675035 49 + TSS region transcription start site region 38541
Tssr38542 4 116678776 to 116678800 24 + TSS region transcription start site region 38542
Tssr42919 4 116679325 to 116679333 8 - TSS region transcription start site region 42919
Tssr42920 4 116682981 to 116683009 28 - TSS region transcription start site region 42920
Tssr42921 4 116684335 to 116684358 23 - TSS region transcription start site region 42921
AV051173 4 116684962 to 116686022 1060 - DNA segment expressed sequence AV051173
Cpgi14638 4 116685399 to 116686188 789 CpG island CpG island 14638
Tssr42922 4 116685401 to 116685418 17 - TSS region transcription start site region 42922
Tssr38543 4 116685590 to 116685608 18 + TSS region transcription start site region 38543
Prdx1 4 116685599 to 116700000 14401 + protein coding gene peroxiredoxin 1
Tssr1272 4 116685656 to 116685674 18 + TSS region transcription start site region 1272
Tssr38544 4 116685859 to 116685872 13 + TSS region transcription start site region 38544
Tssr42923 4 116685973 to 116686011 38 - TSS region transcription start site region 42923
Tssr1273 4 116686165 to 116686189 24 + TSS region transcription start site region 1273
Tssr38545 4 116686382 to 116686424 42 + TSS region transcription start site region 38545
Tssr38546 4 116686564 to 116686575 11 + TSS region transcription start site region 38546
Tssr38547 4 116686896 to 116686908 12 + TSS region transcription start site region 38547
Tssr38548 4 116687174 to 116687185 11 + TSS region transcription start site region 38548
Tssr38549 4 116687194 to 116687218 24 + TSS region transcription start site region 38549
Tssr38550 4 116687225 to 116687239 14 + TSS region transcription start site region 38550
Tssr38551 4 116687249 to 116687260 11 + TSS region transcription start site region 38551
Tssr38552 4 116687326 to 116687329 3 + TSS region transcription start site region 38552
Tssr38553 4 116687437 to 116687474 37 + TSS region transcription start site region 38553
Tssr38554 4 116687841 to 116687848 7 + TSS region transcription start site region 38554
Tssr38555 4 116689893 to 116689908 15 + TSS region transcription start site region 38555
Tssr38556 4 116690060 to 116690070 10 + TSS region transcription start site region 38556
Tssr38557 4 116690673 to 116690697 24 + TSS region transcription start site region 38557
Tssr38558 4 116691052 to 116691059 7 + TSS region transcription start site region 38558
Tssr38559 4 116691816 to 116691899 83 + TSS region transcription start site region 38559
Tssr38560 4 116691926 to 116691937 11 + TSS region transcription start site region 38560
Tssr38561 4 116693719 to 116693745 26 + TSS region transcription start site region 38561
Tssr38562 4 116693817 to 116693855 38 + TSS region transcription start site region 38562
Tssr38563 4 116693947 to 116693960 13 + TSS region transcription start site region 38563
Tssr38564 4 116694080 to 116694095 15 + TSS region transcription start site region 38564
Tssr38565 4 116694111 to 116694128 17 + TSS region transcription start site region 38565
Tssr38566 4 116696019 to 116696047 28 + TSS region transcription start site region 38566
9530001N24Rik 4 116697076 to 116697506 430 unclassified gene RIKEN cDNA 9530001N24 gene
Tssr38567 4 116699161 to 116699182 21 + TSS region transcription start site region 38567
Tssr38568 4 116699219 to 116699317 98 + TSS region transcription start site region 38568
Tssr38569 4 116699387 to 116699455 68 + TSS region transcription start site region 38569
Tssr164686 4 116699509 to 116699513 4 - TSS region transcription start site region 164686
Tssr38570 4 116700032 to 116700037 5 + TSS region transcription start site region 38570
Tssr38571 4 116701823 to 116701836 13 + TSS region transcription start site region 38571
Mmachc 4 116702434 to 116708385 5951 - protein coding gene methylmalonic aciduria cblC type, with homocystinuria
Tssr38572 4 116708122 to 116708133 11 + TSS region transcription start site region 38572
4930565M07Rik 4 116708124 to 116708431 307 unclassified gene RIKEN cDNA 4930565M07 gene
Cpgi14639 4 116708145 to 116708776 631 CpG island CpG island 14639
Tssr42924 4 116708262 to 116708269 7 - TSS region transcription start site region 42924
Tssr42925 4 116708312 to 116708356 44 - TSS region transcription start site region 42925
Tssr38573 4 116708467 to 116708472 5 + TSS region transcription start site region 38573
Tssr42926 4 116708540 to 116708555 15 - TSS region transcription start site region 42926
Tssr38574 4 116708575 to 116708584 9 + TSS region transcription start site region 38574
Ccdc163 4 116708583 to 116715104 6521 + protein coding gene coiled-coil domain containing 163
Tssr38575 4 116708587 to 116708604 17 + TSS region transcription start site region 38575
Tssr38576 4 116708624 to 116708635 11 + TSS region transcription start site region 38576
Tssr38577 4 116708687 to 116708696 9 + TSS region transcription start site region 38577
Tssr38578 4 116708701 to 116708712 11 + TSS region transcription start site region 38578
Tssr38579 4 116709234 to 116709239 5 + TSS region transcription start site region 38579
Tssr38580 4 116711901 to 116711905 4 + TSS region transcription start site region 38580
Cpgi14640 4 116720794 to 116721440 646 CpG island CpG island 14640
Tesk2 4 116720907 to 116804248 83341 + protein coding gene testis-specific kinase 2
Tssr38581 4 116720920 to 116721004 84 + TSS region transcription start site region 38581
Tssr38582 4 116721067 to 116721078 11 + TSS region transcription start site region 38582
Gm27688 4 116725899 to 116725989 90 + unclassified non-coding RNA gene predicted gene, 27688
D4Dcr17 4 116796039 to 116796142 103 DNA segment DNA Segment, Chr 4, Derry C. Roopenian 17
Toe1 4 116804003 to 116807635 3632 - protein coding gene target of EGR1, member 1 (nuclear)