Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:116598914-116638945

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ccdc17 4 116596730 to 116600266 3536 + protein coding gene coiled-coil domain containing 17
Nasp 4 116601052 to 116627941 26889 - protein coding gene nuclear autoantigenic sperm protein (histone-binding)
Tssr42888 4 116610736 to 116610751 15 - TSS region transcription start site region 42888
Tssr38532 4 116610978 to 116611016 38 + TSS region transcription start site region 38532
Tssr42889 4 116611296 to 116611310 14 - TSS region transcription start site region 42889
Tssr38533 4 116611326 to 116611348 22 + TSS region transcription start site region 38533
Tssr42890 4 116611342 to 116611371 29 - TSS region transcription start site region 42890
Tssr38534 4 116612018 to 116612037 19 + TSS region transcription start site region 38534
Tssr42891 4 116612057 to 116612070 13 - TSS region transcription start site region 42891
Tssr42892 4 116615277 to 116615301 24 - TSS region transcription start site region 42892
Tssr42893 4 116618914 to 116618945 31 - TSS region transcription start site region 42893
Cpgi14636 4 116626712 to 116627514 802 CpG island CpG island 14636
A430091L06Rik 4 116626842 to 116628686 1844 unclassified gene RIKEN cDNA A430091L06 gene
Tssr42894 4 116627367 to 116627397 30 - TSS region transcription start site region 42894
Tssr42895 4 116627486 to 116627503 17 - TSS region transcription start site region 42895
Tssr42896 4 116627896 to 116627908 12 - TSS region transcription start site region 42896
Tssr42897 4 116627921 to 116627956 35 - TSS region transcription start site region 42897
Tssr42898 4 116627972 to 116627988 16 - TSS region transcription start site region 42898
Tssr38535 4 116636508 to 116636517 9 + TSS region transcription start site region 38535
Akr1a1 4 116636510 to 116651674 15164 - protein coding gene aldo-keto reductase family 1, member A1 (aldehyde reductase)
Tssr42899 4 116637517 to 116637521 4 - TSS region transcription start site region 42899
Tssr38536 4 116637746 to 116637757 11 + TSS region transcription start site region 38536
Tssr38537 4 116637800 to 116637822 22 + TSS region transcription start site region 38537
Tssr42900 4 116638463 to 116638477 14 - TSS region transcription start site region 42900