Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:116593463-116683477

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60 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gpbp1l1 4 116557658 to 116593882 36224 + protein coding gene GC-rich promoter binding protein 1-like 1
C530005A16Rik 4 116589733 to 116597630 7897 - lncRNA gene RIKEN cDNA C530005A16 gene
Tssr38527 4 116593442 to 116593490 48 + TSS region transcription start site region 38527
Tssr38528 4 116596637 to 116596665 28 + TSS region transcription start site region 38528
Tssr38529 4 116596672 to 116596703 31 + TSS region transcription start site region 38529
Ccdc17 4 116596730 to 116600266 3536 + protein coding gene coiled-coil domain containing 17
Tssr38530 4 116596731 to 116596746 15 + TSS region transcription start site region 38530
Tssr38531 4 116596778 to 116596782 4 + TSS region transcription start site region 38531
Cpgi14635 4 116597210 to 116597990 780 CpG island CpG island 14635
Tssr42887 4 116597604 to 116597644 40 - TSS region transcription start site region 42887
Nasp 4 116601052 to 116627941 26889 - protein coding gene nuclear autoantigenic sperm protein (histone-binding)
Tssr42888 4 116610736 to 116610751 15 - TSS region transcription start site region 42888
Tssr38532 4 116610978 to 116611016 38 + TSS region transcription start site region 38532
Tssr42889 4 116611296 to 116611310 14 - TSS region transcription start site region 42889
Tssr38533 4 116611326 to 116611348 22 + TSS region transcription start site region 38533
Tssr42890 4 116611342 to 116611371 29 - TSS region transcription start site region 42890
Tssr38534 4 116612018 to 116612037 19 + TSS region transcription start site region 38534
Tssr42891 4 116612057 to 116612070 13 - TSS region transcription start site region 42891
Tssr42892 4 116615277 to 116615301 24 - TSS region transcription start site region 42892
Tssr42893 4 116618914 to 116618945 31 - TSS region transcription start site region 42893
Cpgi14636 4 116626712 to 116627514 802 CpG island CpG island 14636
A430091L06Rik 4 116626842 to 116628686 1844 unclassified gene RIKEN cDNA A430091L06 gene
Tssr42894 4 116627367 to 116627397 30 - TSS region transcription start site region 42894
Tssr42895 4 116627486 to 116627503 17 - TSS region transcription start site region 42895
Tssr42896 4 116627896 to 116627908 12 - TSS region transcription start site region 42896
Tssr42897 4 116627921 to 116627956 35 - TSS region transcription start site region 42897
Tssr42898 4 116627972 to 116627988 16 - TSS region transcription start site region 42898
Tssr38535 4 116636508 to 116636517 9 + TSS region transcription start site region 38535
Akr1a1 4 116636510 to 116651674 15164 - protein coding gene aldo-keto reductase family 1, member A1 (aldehyde reductase)
Tssr42899 4 116637517 to 116637521 4 - TSS region transcription start site region 42899
Tssr38536 4 116637746 to 116637757 11 + TSS region transcription start site region 38536
Tssr38537 4 116637800 to 116637822 22 + TSS region transcription start site region 38537
Tssr42900 4 116638463 to 116638477 14 - TSS region transcription start site region 42900
Tssr42901 4 116639071 to 116639107 36 - TSS region transcription start site region 42901
Tssr42902 4 116639150 to 116639163 13 - TSS region transcription start site region 42902
Tssr42903 4 116639958 to 116640005 47 - TSS region transcription start site region 42903
Tssr42904 4 116641040 to 116641053 13 - TSS region transcription start site region 42904
Tssr42905 4 116641068 to 116641084 16 - TSS region transcription start site region 42905
Tssr42906 4 116641111 to 116641128 17 - TSS region transcription start site region 42906
Tssr42907 4 116641135 to 116641153 18 - TSS region transcription start site region 42907
Tssr38538 4 116649807 to 116649849 42 + TSS region transcription start site region 38538
Tssr42908 4 116650467 to 116650487 20 - TSS region transcription start site region 42908
Cpgi14637 4 116651087 to 116651707 620 CpG island CpG island 14637
Tssr42909 4 116651389 to 116651409 20 - TSS region transcription start site region 42909
Tssr42910 4 116651419 to 116651426 7 - TSS region transcription start site region 42910
Tssr42911 4 116651435 to 116651446 11 - TSS region transcription start site region 42911
Tssr38539 4 116651508 to 116651535 27 + TSS region transcription start site region 38539
Tssr42912 4 116651541 to 116651549 8 - TSS region transcription start site region 42912
Tssr42913 4 116651566 to 116651571 5 - TSS region transcription start site region 42913
Tssr42914 4 116651596 to 116651636 40 - TSS region transcription start site region 42914
Tssr42915 4 116651644 to 116651665 21 - TSS region transcription start site region 42915
Tssr42916 4 116651677 to 116651682 5 - TSS region transcription start site region 42916
Tssr42917 4 116659552 to 116659560 8 - TSS region transcription start site region 42917
Tssr42918 4 116666769 to 116666784 15 - TSS region transcription start site region 42918
Tssr38540 4 116668486 to 116668505 19 + TSS region transcription start site region 38540
Gm25137 4 116674153 to 116674262 109 + snRNA gene predicted gene, 25137
Tssr38541 4 116674986 to 116675035 49 + TSS region transcription start site region 38541
Tssr38542 4 116678776 to 116678800 24 + TSS region transcription start site region 38542
Tssr42919 4 116679325 to 116679333 8 - TSS region transcription start site region 42919
Tssr42920 4 116682981 to 116683009 28 - TSS region transcription start site region 42920