Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:116256762-116514183

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm49337 4 116173384 to 116299841 126457 + protein coding gene predicted gene, 49337
Pik3r3 4 116221618 to 116303056 81438 + protein coding gene phosphoinositide-3-kinase regulatory subunit 3
D4Mit333 4 116289409 to 116289524 115 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 333
Tssr38515 4 116303851 to 116303854 3 + TSS region transcription start site region 38515
Mast2 4 116306762 to 116464183 157421 - protein coding gene microtubule associated serine/threonine kinase 2
Tssr42872 4 116329865 to 116329869 4 - TSS region transcription start site region 42872
Tssr42873 4 116371659 to 116371663 4 - TSS region transcription start site region 42873
Tssr42874 4 116371724 to 116371743 19 - TSS region transcription start site region 42874
Tssr42875 4 116371748 to 116371759 11 - TSS region transcription start site region 42875
Tssr42876 4 116371769 to 116371783 14 - TSS region transcription start site region 42876
Tssr42877 4 116371801 to 116371818 17 - TSS region transcription start site region 42877
A630078A22Rik 4 116382321 to 116385745 3424 unclassified gene RIKEN cDNA A630078A22 gene
Tssr42878 4 116404519 to 116404524 5 - TSS region transcription start site region 42878
Tssr42879 4 116406108 to 116406120 12 - TSS region transcription start site region 42879
Tssr42880 4 116406134 to 116406238 104 - TSS region transcription start site region 42880
Tssr42881 4 116406845 to 116406861 16 - TSS region transcription start site region 42881
Mmtg2 4 116413782 to 124161387 7747605 QTL modifier of mammary tumor growth 2
D4Mit200 4 116413782 to 116413923 141 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 200
Abd1 4 116413923 to 89063832 -27350091 QTL autoimmune biliary disease 1
Tssr38516 4 116448678 to 116448685 7 + TSS region transcription start site region 38516
Gm12950 4 116448788 to 116449204 416 + pseudogene predicted gene 12950
Cpgi14632 4 116463358 to 116464871 1513 CpG island CpG island 14632
Tssr42882 4 116464151 to 116464274 123 - TSS region transcription start site region 42882
Cpgi14633 4 116507285 to 116507993 708 CpG island CpG island 14633
Tssr42883 4 116507466 to 116507492 26 - TSS region transcription start site region 42883
Ipp 4 116507549 to 116538243 30694 + protein coding gene IAP promoted placental gene
Tssr38517 4 116507584 to 116507623 39 + TSS region transcription start site region 38517