Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:114917220-115057256

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Foxd2os 4 114909289 to 114921118 11829 + lncRNA gene forkhead box D2, opposite strand
Cpgi14601 4 114924507 to 114926467 1960 CpG island CpG island 14601
Foxe3 4 114925147 to 114926013 866 - protein coding gene forkhead box E3
Tssr42819 4 114925581 to 114925592 11 - TSS region transcription start site region 42819
Tssr42820 4 114926064 to 114926069 5 - TSS region transcription start site region 42820
Gm40229 4 114946813 to 114950848 4035 - lncRNA gene predicted gene, 40229
Cmpk1 4 114960613 to 114987228 26615 - protein coding gene cytidine monophosphate (UMP-CMP) kinase 1
Tssr42821 4 114970512 to 114970516 4 - TSS region transcription start site region 42821
Cpgi14602 4 114986352 to 114987592 1240 CpG island CpG island 14602
Tssr38423 4 114986664 to 114986684 20 + TSS region transcription start site region 38423
Tssr42822 4 114987125 to 114987203 78 - TSS region transcription start site region 42822
Tssr42823 4 114987220 to 114987256 36 - TSS region transcription start site region 42823
Tssr38424 4 114987259 to 114987306 47 + TSS region transcription start site region 38424
Tssr38425 4 114987324 to 114987337 13 + TSS region transcription start site region 38425
Gm24045 4 114987964 to 114988061 97 + unclassified non-coding RNA gene predicted gene, 24045
Cpgi14603 4 114999846 to 115000482 636 CpG island CpG island 14603
Tssr38426 4 115000156 to 115000170 14 + TSS region transcription start site region 38426
Stil 4 115000159 to 115043196 43037 + protein coding gene Scl/Tal1 interrupting locus
Tssr38427 4 115000174 to 115000189 15 + TSS region transcription start site region 38427
Tssr38428 4 115000190 to 115000209 19 + TSS region transcription start site region 38428
Tssr38429 4 115000221 to 115000229 8 + TSS region transcription start site region 38429
Tssr38430 4 115000234 to 115000244 10 + TSS region transcription start site region 38430
Tssr38431 4 115000247 to 115000268 21 + TSS region transcription start site region 38431
Tssr1266 4 115004745 to 115004749 4 + TSS region transcription start site region 1266
Cpgi14604 4 115052531 to 115053044 513 CpG island CpG island 14604
Cpgi14605 4 115056293 to 115058111 1818 CpG island CpG island 14605
Tal1 4 115056426 to 115071755 15329 + protein coding gene T cell acute lymphocytic leukemia 1
Tssr38432 4 115056738 to 115056749 11 + TSS region transcription start site region 38432
Tssr38433 4 115056763 to 115056782 19 + TSS region transcription start site region 38433
Tssr38434 4 115057010 to 115057039 29 + TSS region transcription start site region 38434
Tssr38435 4 115057041 to 115057060 19 + TSS region transcription start site region 38435
Tssr38436 4 115057116 to 115057127 11 + TSS region transcription start site region 38436