MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:114836803-114967550

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19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm12830	4	114821722 to 114856166	34444	+	protein coding gene	predicted gene 12830
Cpgi14597	4	114843068 to 114843789	721		CpG island	CpG island 14597
Gm23230	4	114844985 to 114845117	132	-	snRNA gene	predicted gene, 23230
Cpgi14598	4	114901803 to 114902550	747		CpG island	CpG island 14598
Cpgi14599	4	114902606 to 114902936	330		CpG island	CpG island 14599
Foxd2	4	114906282 to 114908873	2591	-	protein coding gene	forkhead box D2
Cpgi14600	4	114906971 to 114909805	2834		CpG island	CpG island 14600
Tssr42817	4	114908892 to 114908914	22	-	TSS region	transcription start site region 42817
Tssr42818	4	114908919 to 114908946	27	-	TSS region	transcription start site region 42818
Tssr38420	4	114909252 to 114909269	17	+	TSS region	transcription start site region 38420
Tssr38421	4	114909271 to 114909322	51	+	TSS region	transcription start site region 38421
Foxd2os	4	114909289 to 114921118	11829	+	lncRNA gene	forkhead box D2, opposite strand
Tssr38422	4	114909844 to 114909848	4	+	TSS region	transcription start site region 38422
Cpgi14601	4	114924507 to 114926467	1960		CpG island	CpG island 14601
Foxe3	4	114925147 to 114926013	866	-	protein coding gene	forkhead box E3
Tssr42819	4	114925581 to 114925592	11	-	TSS region	transcription start site region 42819
Tssr42820	4	114926064 to 114926069	5	-	TSS region	transcription start site region 42820
Gm40229	4	114946813 to 114950848	4035	-	lncRNA gene	predicted gene, 40229
Cmpk1	4	114960613 to 114987228	26615	-	protein coding gene	cytidine monophosphate (UMP-CMP) kinase 1