MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:11481068-11611095

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi14037	4	11485580 to 11486468	888		CpG island	CpG island 14037
Tssr36481	4	11485947 to 11485964	17	+	TSS region	transcription start site region 36481
Virma	4	11485958 to 11550684	64726	+	protein coding gene	vir like m6A methyltransferase associated
Tssr36482	4	11485966 to 11485973	7	+	TSS region	transcription start site region 36482
Tssr36483	4	11486002 to 11486045	43	+	TSS region	transcription start site region 36483
Gm11831	4	11501456 to 11502839	1383	-	antisense lncRNA gene	predicted gene 11831
Tssr36484	4	11535281 to 11535285	4	+	TSS region	transcription start site region 36484
Tssr36485	4	11546068 to 11546095	27	+	TSS region	transcription start site region 36485
Gm35693	4	11551434 to 11558931	7497	-	lncRNA gene	predicted gene, 35693
Cpgi14038	4	11558638 to 11559272	634		CpG island	CpG island 14038
Tssr40937	4	11558754 to 11558763	9	-	TSS region	transcription start site region 40937
Tssr36486	4	11558914 to 11558979	65	+	TSS region	transcription start site region 36486
Rad54b	4	11558922 to 11615805	56883	+	protein coding gene	RAD54 homolog B (S. cerevisiae)
Tssr40938	4	11559191 to 11559202	11	-	TSS region	transcription start site region 40938
Tssr36487	4	11573617 to 11573620	3	+	TSS region	transcription start site region 36487
Tssr36488	4	11579647 to 11579674	27	+	TSS region	transcription start site region 36488
Fsbp	4	11579665 to 11587591	7926	+	protein coding gene	fibrinogen silencer binding protein
Tssr36489	4	11604484 to 11604488	4	+	TSS region	transcription start site region 36489