MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:114726093-114914878

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
D4Mit307	4	114746033 to 114746155	122		DNA segment	DNA Segment, Chr 4, Massachusetts Institute of Technology 307
D4Mit52	4	114800671 to 114800785	114		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 52
9130410C08Rik	4	114816093 to 114824878	8785	-	antisense lncRNA gene	RIKEN cDNA 9130410C08 gene
D4Mit220	4	114816859 to 114816988	129		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 220
Cpgi14596	4	114821491 to 114822249	758		CpG island	CpG island 14596
Gm12830	4	114821722 to 114856166	34444	+	protein coding gene	predicted gene 12830
Cpgi14597	4	114843068 to 114843789	721		CpG island	CpG island 14597
Gm23230	4	114844985 to 114845117	132	-	snRNA gene	predicted gene, 23230
Cpgi14598	4	114901803 to 114902550	747		CpG island	CpG island 14598
Cpgi14599	4	114902606 to 114902936	330		CpG island	CpG island 14599
Foxd2	4	114906282 to 114908873	2591	-	protein coding gene	forkhead box D2
Cpgi14600	4	114906971 to 114909805	2834		CpG island	CpG island 14600
Tssr42817	4	114908892 to 114908914	22	-	TSS region	transcription start site region 42817
Tssr42818	4	114908919 to 114908946	27	-	TSS region	transcription start site region 42818
Tssr38420	4	114909252 to 114909269	17	+	TSS region	transcription start site region 38420
Tssr38421	4	114909271 to 114909322	51	+	TSS region	transcription start site region 38421
Foxd2os	4	114909289 to 114921118	11829	+	lncRNA gene	forkhead box D2, opposite strand
Tssr38422	4	114909844 to 114909848	4	+	TSS region	transcription start site region 38422