MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:114520340-114843404

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Trabd2b	4	114406724 to 114615098	208374	+	protein coding gene	TraB domain containing 2B
Gm33655	4	114576917 to 114592223	15306	-	lncRNA gene	predicted gene, 33655
Tssr38418	4	114610606 to 114610610	4	+	TSS region	transcription start site region 38418
Tssr42815	4	114643122 to 114643126	4	-	TSS region	transcription start site region 42815
Cpgi14593	4	114648621 to 114649018	397		CpG island	CpG island 14593
Cpgi14594	4	114665732 to 114666011	279		CpG island	CpG island 14594
Cpgi14595	4	114666425 to 114667104	679		CpG island	CpG island 14595
Gm28864	4	114672697 to 114673340	643	-	lincRNA gene	predicted gene 28864
Gm12829	4	114680340 to 114683404	3064	+	lincRNA gene	predicted gene 12829
Tssr38419	4	114680769 to 114680782	13	+	TSS region	transcription start site region 38419
Tssr42816	4	114688716 to 114688732	16	-	TSS region	transcription start site region 42816
D4Mit307	4	114746033 to 114746155	122		DNA segment	DNA Segment, Chr 4, Massachusetts Institute of Technology 307
D4Mit52	4	114800671 to 114800785	114		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 52
9130410C08Rik	4	114816093 to 114824878	8785	-	antisense lncRNA gene	RIKEN cDNA 9130410C08 gene
D4Mit220	4	114816859 to 114816988	129		DNA segment	DNA segment, Chr 4, Massachusetts Institute of Technology 220
Cpgi14596	4	114821491 to 114822249	758		CpG island	CpG island 14596
Gm12830	4	114821722 to 114856166	34444	+	protein coding gene	predicted gene 12830
Cpgi14597	4	114843068 to 114843789	721		CpG island	CpG island 14597