Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:113765123-114565876

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25 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skint5 4 113477891 to 113999503 521612 - protein coding gene selection and upkeep of intraepithelial T cells 5
Tssr42811 4 113999487 to 113999497 10 - TSS region transcription start site region 42811
Tssr42812 4 113999500 to 113999511 11 - TSS region transcription start site region 42812
Tssr1265 4 113999515 to 113999518 3 - TSS region transcription start site region 1265
Tssr42813 4 113999520 to 113999531 11 - TSS region transcription start site region 42813
Gm12825 4 114096390 to 114097401 1011 - pseudogene predicted gene 12825
Skint11 4 114163384 to 114245028 81644 + protein coding gene selection and upkeep of intraepithelial T cells 11
Tssr38408 4 114163420 to 114163434 14 + TSS region transcription start site region 38408
Tssr38409 4 114163437 to 114163448 11 + TSS region transcription start site region 38409
Tssr38410 4 114163458 to 114163470 12 + TSS region transcription start site region 38410
Gm15741 4 114165123 to 114165876 753 - pseudogene predicted gene 15741
Gm40228 4 114329906 to 114346623 16717 - lncRNA gene predicted gene, 40228
D4Mit74 4 114353855 to 114354033 178 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 74
Tssr38411 4 114388434 to 114388440 6 + TSS region transcription start site region 38411
Cpgi14592 4 114405595 to 114407255 1660 CpG island CpG island 14592
Tssr38412 4 114406035 to 114406053 18 + TSS region transcription start site region 38412
Tssr38413 4 114406206 to 114406256 50 + TSS region transcription start site region 38413
Tssr38414 4 114406667 to 114406710 43 + TSS region transcription start site region 38414
Tssr38415 4 114406717 to 114406733 16 + TSS region transcription start site region 38415
Trabd2b 4 114406724 to 114615098 208374 + protein coding gene TraB domain containing 2B
Gm33710 4 114413971 to 114414949 978 - lncRNA gene predicted gene, 33710
Tssr38416 4 114445118 to 114445122 4 + TSS region transcription start site region 38416
Tssr42814 4 114470901 to 114470905 4 - TSS region transcription start site region 42814
D4Mit332 4 114491994 to 114492142 148 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 332
Tssr38417 4 114511488 to 114511494 6 + TSS region transcription start site region 38417