Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:112200170-113211236

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28 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Skint3 4 112232245 to 112300468 68223 + protein coding gene selection and upkeep of intraepithelial T cells 3
Tssr38404 4 112232266 to 112232274 8 + TSS region transcription start site region 38404
Tssr1263 4 112232330 to 112232335 5 + TSS region transcription start site region 1263
Tssr38405 4 112232346 to 112232386 40 + TSS region transcription start site region 38405
Tssr1264 4 112232391 to 112232408 17 + TSS region transcription start site region 1264
Tssr38406 4 112284801 to 112284813 12 + TSS region transcription start site region 38406
Tssr38407 4 112288673 to 112288683 10 + TSS region transcription start site region 38407
Skint9 4 112385969 to 112433985 48016 - protein coding gene selection and upkeep of intraepithelial T cells 9
Tssr42803 4 112433979 to 112433993 14 - TSS region transcription start site region 42803
Tssr42804 4 112434005 to 112434014 9 - TSS region transcription start site region 42804
Gm12819 4 112512740 to 112521472 8732 + pseudogene predicted gene 12819
Gm12821 4 112537061 to 112537660 599 + pseudogene predicted gene 12821
Gm12814 4 112566407 to 112593053 26646 + pseudogene predicted gene 12814
Gm24099 4 112590772 to 112590878 106 - snRNA gene predicted gene, 24099
Skint2 4 112613597 to 112652248 38651 + protein coding gene selection and upkeep of intraepithelial T cells 2
D4Sh1 4 112668100 to 112668494 394 DNA segment DNA segment, Chr 4, Steve Hardies 1
Gm12817 4 112705170 to 112706236 1066 + pseudogene predicted gene 12817
Skint10 4 112711147 to 112774866 63719 - protein coding gene selection and upkeep of intraepithelial T cells 10
Gm18400 4 112772092 to 112773268 1176 + pseudogene predicted gene, 18400
Tssr42805 4 112774816 to 112774832 16 - TSS region transcription start site region 42805
Tssr42806 4 112774841 to 112774854 13 - TSS region transcription start site region 42806
Tssr42807 4 112774860 to 112774871 11 - TSS region transcription start site region 42807
Skint6 4 112804616 to 113286973 482357 - protein coding gene selection and upkeep of intraepithelial T cells 6
Gm12823 4 112923696 to 112945317 21621 + antisense lncRNA gene predicted gene 12823
D4Mit247a 4 112947170 to 112947317 147 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 247a
Gm12816 4 112955075 to 112956286 1211 - pseudogene predicted gene 12816
Gm12818 4 112978465 to 112979813 1348 - pseudogene predicted gene 12818
Cpgi14591 4 112979376 to 112979871 495 CpG island CpG island 14591