Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:111755598-112005614

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19 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spata6 4 111719949 to 111829137 109188 + protein coding gene spermatogenesis associated 6
Tssr38391 4 111777553 to 111777562 9 + TSS region transcription start site region 38391
Tssr38392 4 111777575 to 111777617 42 + TSS region transcription start site region 38392
Gm12961 4 111790624 to 111791673 1049 - pseudogene predicted gene 12961
Gm12960 4 111807358 to 111808423 1065 - pseudogene predicted gene 12960
Tssr38393 4 111827982 to 111827996 14 + TSS region transcription start site region 38393
Cafq2 4 111875058 to 111875257 199 QTL caffeine metabolism QTL 2
D4Mit199 4 111875058 to 111875257 199 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 199
Slc5a9 4 111875374 to 111902796 27422 - protein coding gene solute carrier family 5 (sodium/glucose cotransporter), member 9
Tssr42799 4 111880598 to 111880614 16 - TSS region transcription start site region 42799
Tssr42800 4 111880643 to 111880677 34 - TSS region transcription start site region 42800
Tssr42801 4 111898695 to 111898725 30 - TSS region transcription start site region 42801
Tssr42802 4 111902783 to 111902801 18 - TSS region transcription start site region 42802
Skint8 4 111919555 to 111950361 30806 + protein coding gene selection and upkeep of intraepithelial T cells 8
Tssr38394 4 111972833 to 111972854 21 + TSS region transcription start site region 38394
Tssr38395 4 111972922 to 111972946 24 + TSS region transcription start site region 38395
Skint7 4 111972923 to 111988223 15300 + protein coding gene selection and upkeep of intraepithelial T cells 7
Tssr38396 4 111973032 to 111973072 40 + TSS region transcription start site region 38396
Gm25844 4 111988650 to 111988958 308 - unclassified non-coding RNA gene predicted gene, 25844