Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:11169248-11339266

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Trp53inp1 4 11156441 to 11174377 17936 + protein coding gene transformation related protein 53 inducible nuclear protein 1
Tssr36470 4 11169799 to 11169808 9 + TSS region transcription start site region 36470
Tssr36471 4 11169913 to 11169942 29 + TSS region transcription start site region 36471
Tssr36472 4 11171898 to 11171964 66 + TSS region transcription start site region 36472
Tssr36473 4 11173832 to 11173881 49 + TSS region transcription start site region 36473
A630034I12Rik 4 11175962 to 11191230 15268 - lncRNA gene RIKEN cDNA A630034I12 gene
Cpgi14031 4 11190312 to 11192465 2153 CpG island CpG island 14031
Tssr40920 4 11191214 to 11191233 19 - TSS region transcription start site region 40920
Ccne2 4 11191351 to 11204779 13428 + protein coding gene cyclin E2
Tssr36474 4 11191417 to 11191424 7 + TSS region transcription start site region 36474
Tssr36475 4 11191776 to 11191789 13 + TSS region transcription start site region 36475
Ints8 4 11199158 to 11254258 55100 - protein coding gene integrator complex subunit 8
Tssr36476 4 11202410 to 11202413 3 + TSS region transcription start site region 36476
Tssr40921 4 11209270 to 11209282 12 - TSS region transcription start site region 40921
Tssr40922 4 11235544 to 11235565 21 - TSS region transcription start site region 40922
Tssr40923 4 11248206 to 11248231 25 - TSS region transcription start site region 40923
Cpgi14032 4 11253439 to 11254482 1043 CpG island CpG island 14032
Tssr40924 4 11254194 to 11254246 52 - TSS region transcription start site region 40924
Tssr40925 4 11254248 to 11254266 18 - TSS region transcription start site region 40925
Dpy19l4 4 11261315 to 11322137 60822 - protein coding gene dpy-19-like 4 (C. elegans)
Gm22940 4 11279265 to 11279419 154 - snRNA gene predicted gene, 22940
Cpgi14033 4 11321604 to 11322506 902 CpG island CpG island 14033
Tssr36477 4 11321900 to 11321913 13 + TSS region transcription start site region 36477
Tssr36478 4 11321930 to 11321937 7 + TSS region transcription start site region 36478
Gm26663 4 11321944 to 11342953 21009 + lincRNA gene predicted gene, 26663
Tssr40926 4 11322076 to 11322089 13 - TSS region transcription start site region 40926
Tssr40927 4 11322109 to 11322146 37 - TSS region transcription start site region 40927
Tssr36479 4 11322230 to 11322248 18 + TSS region transcription start site region 36479
Esrp1 4 11331933 to 11386783 54850 - protein coding gene epithelial splicing regulatory protein 1