Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:111102818-111752933

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Agbl4 4 110397661 to 111664324 1266663 + protein coding gene ATP/GTP binding protein-like 4
Tssr38378 4 111252532 to 111252533 1 + TSS region transcription start site region 38378
Gm12804 4 111290124 to 111291113 989 + pseudogene predicted gene 12804
Tssr38379 4 111290162 to 111290182 20 + TSS region transcription start site region 38379
Gm12805 4 111319558 to 111320605 1047 - pseudogene predicted gene 12805
Tssr38380 4 111411093 to 111411103 10 + TSS region transcription start site region 38380
Cpgi14589 4 111414748 to 111415523 775 CpG island CpG island 14589
Tssr38381 4 111414959 to 111415036 77 + TSS region transcription start site region 38381
Bend5 4 111415006 to 111460298 45292 + protein coding gene BEN domain containing 5
Tssr38382 4 111415136 to 111415218 82 + TSS region transcription start site region 38382
Tssr38383 4 111415238 to 111415259 21 + TSS region transcription start site region 38383
n-R5s191 4 111427818 to 111427933 115 - rRNA gene nuclear encoded rRNA 5S 191
Tssr42798 4 111477496 to 111477501 5 - TSS region transcription start site region 42798
Tssr1262 4 111515607 to 111515609 2 + TSS region transcription start site region 1262
Gm33192 4 111695614 to 111723986 28372 - lncRNA gene predicted gene, 33192
Cpgi14590 4 111719844 to 111720410 566 CpG island CpG island 14590
Spata6 4 111719949 to 111829137 109188 + protein coding gene spermatogenesis associated 6
Tssr38384 4 111719975 to 111720047 72 + TSS region transcription start site region 38384
Tssr38385 4 111720053 to 111720073 20 + TSS region transcription start site region 38385
Tssr38386 4 111720084 to 111720095 11 + TSS region transcription start site region 38386
Tssr38387 4 111720173 to 111720182 9 + TSS region transcription start site region 38387
Tssr38388 4 111720187 to 111720201 14 + TSS region transcription start site region 38388
Tssr38389 4 111750618 to 111750632 14 + TSS region transcription start site region 38389
Tssr38390 4 111750653 to 111750664 11 + TSS region transcription start site region 38390