Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:110377661-111684324

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi14588 4 110397552 to 110398003 451 CpG island CpG island 14588
Agbl4 4 110397661 to 111664324 1266663 + protein coding gene ATP/GTP binding protein-like 4
Tssr38370 4 110397688 to 110397708 20 + TSS region transcription start site region 38370
Tssr38371 4 110397710 to 110397763 53 + TSS region transcription start site region 38371
Tssr38372 4 110397764 to 110397808 44 + TSS region transcription start site region 38372
Tssr38373 4 110409562 to 110409566 4 + TSS region transcription start site region 38373
C030007D22Rik 4 110434801 to 110435990 1189 unclassified gene RIKEN cDNA C030007D22 gene
Gm12806 4 110510035 to 110510302 267 + pseudogene predicted gene 12806
Gm12807 4 110512771 to 110513732 961 - pseudogene predicted gene 12807
Tssr38374 4 110583927 to 110583931 4 + TSS region transcription start site region 38374
Tssr38375 4 110589414 to 110589417 3 + TSS region transcription start site region 38375
Tssr38376 4 110652620 to 110652626 6 + TSS region transcription start site region 38376
Tssr1261 4 110687374 to 110687378 4 + TSS region transcription start site region 1261
Tssr38377 4 110817846 to 110817850 4 + TSS region transcription start site region 38377
Bmiq6 4 111000000 to 126000000 15000000 QTL body mass index QTL 6
D4Mit120 4 111018252 to 111018399 147 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 120
Tssr38378 4 111252532 to 111252533 1 + TSS region transcription start site region 38378
Gm12804 4 111290124 to 111291113 989 + pseudogene predicted gene 12804
Tssr38379 4 111290162 to 111290182 20 + TSS region transcription start site region 38379
Gm12805 4 111319558 to 111320605 1047 - pseudogene predicted gene 12805
Tssr38380 4 111411093 to 111411103 10 + TSS region transcription start site region 38380
Cpgi14589 4 111414748 to 111415523 775 CpG island CpG island 14589
Tssr38381 4 111414959 to 111415036 77 + TSS region transcription start site region 38381
Bend5 4 111415006 to 111460298 45292 + protein coding gene BEN domain containing 5
Tssr38382 4 111415136 to 111415218 82 + TSS region transcription start site region 38382
Tssr38383 4 111415238 to 111415259 21 + TSS region transcription start site region 38383
n-R5s191 4 111427818 to 111427933 115 - rRNA gene nuclear encoded rRNA 5S 191
Tssr42798 4 111477496 to 111477501 5 - TSS region transcription start site region 42798
Tssr1262 4 111515607 to 111515609 2 + TSS region transcription start site region 1262