Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:11023350-11226998

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm46843 4 11010449 to 11026700 16251 - lncRNA gene predicted gene, 46843
Gm35429 4 11031796 to 11049868 18072 - lncRNA gene predicted gene, 35429
Ndufaf6 4 11051045 to 11076205 25160 - protein coding gene NADH:ubiquinone oxidoreductase complex assembly factor 6
Cpgi14029 4 11075747 to 11076484 737 CpG island CpG island 14029
Tssr40916 4 11076160 to 11076211 51 - TSS region transcription start site region 40916
Tssr1120 4 11105395 to 11105397 2 + TSS region transcription start site region 1120
Gm11827 4 11123350 to 11126998 3648 + lincRNA gene predicted gene 11827
Tssr36462 4 11123950 to 11123980 30 + TSS region transcription start site region 36462
Gm11829 4 11133327 to 11133608 281 + pseudogene predicted gene 11829
Mir684-2 4 11134097 to 11134182 85 + miRNA gene microRNA 684-2
Gm11830 4 11144710 to 11145270 560 + pseudogene predicted gene 11830
Tssr40917 4 11147717 to 11147730 13 - TSS region transcription start site region 40917
Tssr36463 4 11155184 to 11155202 18 + TSS region transcription start site region 36463
Cpgi14030 4 11155994 to 11156966 972 CpG island CpG island 14030
Tssr40918 4 11156209 to 11156224 15 - TSS region transcription start site region 40918
Tssr40919 4 11156242 to 11156258 16 - TSS region transcription start site region 40919
Tssr36464 4 11156411 to 11156453 42 + TSS region transcription start site region 36464
Trp53inp1 4 11156441 to 11174377 17936 + protein coding gene transformation related protein 53 inducible nuclear protein 1
Tssr36465 4 11156468 to 11156483 15 + TSS region transcription start site region 36465
Tssr36466 4 11156765 to 11156778 13 + TSS region transcription start site region 36466
Tssr36467 4 11156828 to 11156837 9 + TSS region transcription start site region 36467
Tssr36468 4 11159316 to 11159321 5 + TSS region transcription start site region 36468
Tssr36469 4 11165259 to 11165286 27 + TSS region transcription start site region 36469
Tssr36470 4 11169799 to 11169808 9 + TSS region transcription start site region 36470
Tssr36471 4 11169913 to 11169942 29 + TSS region transcription start site region 36471
Tssr36472 4 11171898 to 11171964 66 + TSS region transcription start site region 36472
Tssr36473 4 11173832 to 11173881 49 + TSS region transcription start site region 36473
A630034I12Rik 4 11175962 to 11191230 15268 - lncRNA gene RIKEN cDNA A630034I12 gene
Cpgi14031 4 11190312 to 11192465 2153 CpG island CpG island 14031
Tssr40920 4 11191214 to 11191233 19 - TSS region transcription start site region 40920
Ccne2 4 11191351 to 11204779 13428 + protein coding gene cyclin E2
Tssr36474 4 11191417 to 11191424 7 + TSS region transcription start site region 36474
Tssr36475 4 11191776 to 11191789 13 + TSS region transcription start site region 36475
Ints8 4 11199158 to 11254258 55100 - protein coding gene integrator complex subunit 8
Tssr36476 4 11202410 to 11202413 3 + TSS region transcription start site region 36476
Tssr40921 4 11209270 to 11209282 12 - TSS region transcription start site region 40921