Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:109850793-110251444

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Faf1 4 109676627 to 109963960 287333 + protein coding gene Fas-associated factor 1
Cpgi14578 4 109974286 to 109975183 897 CpG island CpG island 14578
Dmrta2os 4 109976738 to 109977813 1075 - antisense lncRNA gene doublesex and mab-3 related transcription factor like family A2, opposite strand
Cpgi14579 4 109976923 to 109978975 2052 CpG island CpG island 14579
Tssr42784 4 109977851 to 109977899 48 - TSS region transcription start site region 42784
Tssr38365 4 109977972 to 109977995 23 + TSS region transcription start site region 38365
Tssr38366 4 109978004 to 109978048 44 + TSS region transcription start site region 38366
Dmrta2 4 109978053 to 109983687 5634 + protein coding gene doublesex and mab-3 related transcription factor like family A2
Tssr38367 4 109978837 to 109978859 22 + TSS region transcription start site region 38367
Cpgi14580 4 109979651 to 109980880 1229 CpG island CpG island 14580
Cpgi14581 4 109981262 to 109983046 1784 CpG island CpG island 14581
Cpgi14582 4 109983497 to 109984370 873 CpG island CpG island 14582
Cpgi14583 4 109984887 to 109985287 400 CpG island CpG island 14583
Cpgi14584 4 110022276 to 110022622 346 CpG island CpG island 14584
Cpgi14585 4 110050793 to 110051444 651 CpG island CpG island 14585
Opfaq9 4 110118593 to 110118593 0 QTL open field activity QTL 9
Cpgi14586 4 110152519 to 110152785 266 CpG island CpG island 14586
Tssr38368 4 110152653 to 110152674 21 + TSS region transcription start site region 38368
Gm33070 4 110152666 to 110156713 4047 + lncRNA gene predicted gene, 33070
Elavl4 4 110203737 to 110351911 148174 - protein coding gene ELAV like RNA binding protein 4
Tssr42785 4 110234380 to 110234387 7 - TSS region transcription start site region 42785