Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:108587466-108830798

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21 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Orc1 4 108579423 to 108614833 35410 + protein coding gene origin recognition complex, subunit 1
Gm12743 4 108592425 to 108619849 27424 - unclassified non-coding RNA gene predicted gene 12743
Cpgi14562 4 108619341 to 108620673 1332 CpG island CpG island 14562
Tssr38307 4 108619925 to 108619994 69 + TSS region transcription start site region 38307
Cc2d1b 4 108619940 to 108634123 14183 + protein coding gene coiled-coil and C2 domain containing 1B
Tssr38308 4 108620009 to 108620027 18 + TSS region transcription start site region 38308
Gm20731 4 108622929 to 108625216 2287 - protein coding gene predicted gene, 20731
Tssr38309 4 108633085 to 108633094 9 + TSS region transcription start site region 38309
Tssr38310 4 108633096 to 108633103 7 + TSS region transcription start site region 38310
Tssr38311 4 108633120 to 108633131 11 + TSS region transcription start site region 38311
Gm17354 4 108633843 to 108637441 3598 - lincRNA gene predicted gene, 17354
Zfyve9 4 108637466 to 108780798 143332 - protein coding gene zinc finger, FYVE domain containing 9
Tssr42734 4 108638623 to 108638636 13 - TSS region transcription start site region 42734
Tssr38312 4 108643141 to 108643150 9 + TSS region transcription start site region 38312
3110021N24Rik 4 108719649 to 108781904 62255 + protein coding gene RIKEN cDNA 3110021N24 gene
Gm12741 4 108731742 to 108732297 555 + pseudogene predicted gene 12741
Cpgi14563 4 108779835 to 108781152 1317 CpG island CpG island 14563
Tssr42735 4 108780640 to 108780760 120 - TSS region transcription start site region 42735
Tssr42736 4 108780782 to 108780803 21 - TSS region transcription start site region 42736
Tssr42737 4 108780811 to 108780848 37 - TSS region transcription start site region 42737
Btf3l4 4 108814295 to 108833614 19319 - protein coding gene basic transcription factor 3-like 4