Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 4:108479423-108714833

Filter by:
40 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tut4 4 108459426 to 108559415 99989 + protein coding gene terminal uridylyl transferase 4
Gm12739 4 108484171 to 108484552 381 - pseudogene predicted gene 12739
Gm23138 4 108498044 to 108498146 102 + snRNA gene predicted gene, 23138
Pglq7 4 108500000 to 88200000 -20300000 QTL pelvic girdle length QTL 7, 10 week
Pglq12 4 108500000 to 83200000 -25300000 QTL pelvic girdle length QTL 12, 16 week
Metcl14 4 108500000 to 87600000 -20900000 QTL metatarsal-calcaneal length 14, 16 week
Zlq8 4 108500000 to 74800000 -33700000 QTL zygomatic length QTL 8, 16 week
Tibw2 4 108500000 to 43000000 -65500000 QTL tibia width 2, proximal, 10 week
Tibl11 4 108500000 to 88600000 -19900000 QTL tibia length 11, 10 week
Gm12737 4 108513781 to 108516817 3036 + lncRNA gene predicted gene 12737
Gm25827 4 108521924 to 108522030 106 - snRNA gene predicted gene, 25827
Gm22345 4 108537491 to 108537597 106 - snRNA gene predicted gene, 22345
Tssr42727 4 108552415 to 108552416 1 - TSS region transcription start site region 42727
Prpf38a 4 108564867 to 108579336 14469 - protein coding gene PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
Cpgi14561 4 108578805 to 108579875 1070 CpG island CpG island 14561
Tssr42728 4 108579096 to 108579107 11 - TSS region transcription start site region 42728
Tssr42729 4 108579109 to 108579151 42 - TSS region transcription start site region 42729
Tssr42730 4 108579174 to 108579188 14 - TSS region transcription start site region 42730
Tssr42731 4 108579248 to 108579308 60 - TSS region transcription start site region 42731
Tssr42732 4 108579321 to 108579329 8 - TSS region transcription start site region 42732
Tssr42733 4 108579330 to 108579352 22 - TSS region transcription start site region 42733
Tssr38304 4 108579418 to 108579427 9 + TSS region transcription start site region 38304
Orc1 4 108579423 to 108614833 35410 + protein coding gene origin recognition complex, subunit 1
Tssr38305 4 108579445 to 108579470 25 + TSS region transcription start site region 38305
Tssr38306 4 108579481 to 108579489 8 + TSS region transcription start site region 38306
Feml19 4 108600000 to 91000000 -17600000 QTL femur length 19, 16 week
Tibl17 4 108600000 to 88600000 -20000000 QTL tibia length 17, 16 week
Gm12743 4 108600084 to 108619944 19860 - lncRNA gene predicted gene 12743
Cpgi14562 4 108619341 to 108620673 1332 CpG island CpG island 14562
Tssr38307 4 108619925 to 108619994 69 + TSS region transcription start site region 38307
Cc2d1b 4 108619940 to 108634123 14183 + protein coding gene coiled-coil and C2 domain containing 1B
Tssr38308 4 108620009 to 108620027 18 + TSS region transcription start site region 38308
Gm20731 4 108622929 to 108625216 2287 - protein coding gene predicted gene, 20731
Tssr38309 4 108633085 to 108633094 9 + TSS region transcription start site region 38309
Tssr38310 4 108633096 to 108633103 7 + TSS region transcription start site region 38310
Tssr38311 4 108633120 to 108633131 11 + TSS region transcription start site region 38311
Gm17354 4 108633843 to 108637441 3598 - lncRNA gene predicted gene, 17354
Zfyve9 4 108637466 to 108780798 143332 - protein coding gene zinc finger, FYVE domain containing 9
Tssr42734 4 108638623 to 108638636 13 - TSS region transcription start site region 42734
Tssr38312 4 108643141 to 108643150 9 + TSS region transcription start site region 38312