Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:108428781-108601817

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40223 4 108430637 to 108454167 23530 + lncRNA gene predicted gene, 40223
Tssr38291 4 108431375 to 108431382 7 + TSS region transcription start site region 38291
Gm12738 4 108450807 to 108451342 535 - pseudogene predicted gene 12738
Tssr42725 4 108451362 to 108451371 9 - TSS region transcription start site region 42725
Tssr38292 4 108458801 to 108458838 37 + TSS region transcription start site region 38292
Cpgi14560 4 108459095 to 108460908 1813 CpG island CpG island 14560
Tssr38293 4 108459389 to 108459451 62 + TSS region transcription start site region 38293
Tut4 4 108459426 to 108559421 99995 + protein coding gene terminal uridylyl transferase 4
Tssr38294 4 108459781 to 108459795 14 + TSS region transcription start site region 38294
Tssr38295 4 108459921 to 108459928 7 + TSS region transcription start site region 38295
Tssr38296 4 108460000 to 108460030 30 + TSS region transcription start site region 38296
Tssr42726 4 108460702 to 108460713 11 - TSS region transcription start site region 42726
Tssr38297 4 108460819 to 108460842 23 + TSS region transcription start site region 38297
Tssr38298 4 108460921 to 108460932 11 + TSS region transcription start site region 38298
Gm24967 4 108466944 to 108467050 106 - snRNA gene predicted gene, 24967
Tssr38299 4 108467038 to 108467042 4 + TSS region transcription start site region 38299
Tssr38300 4 108473601 to 108473605 4 + TSS region transcription start site region 38300
Tssr38301 4 108478892 to 108478909 17 + TSS region transcription start site region 38301
Tssr38302 4 108478967 to 108478980 13 + TSS region transcription start site region 38302
Tssr38303 4 108479211 to 108479224 13 + TSS region transcription start site region 38303
Gm12739 4 108484171 to 108484552 381 - pseudogene predicted gene 12739
Gm23138 4 108498044 to 108498146 102 + snRNA gene predicted gene, 23138
Gm12737 4 108513781 to 108516817 3036 + sense intronic lncRNA gene predicted gene 12737
Gm25827 4 108521924 to 108522030 106 - snRNA gene predicted gene, 25827
Gm22345 4 108537491 to 108537597 106 - snRNA gene predicted gene, 22345
Tssr42727 4 108552415 to 108552416 1 - TSS region transcription start site region 42727
Prpf38a 4 108564867 to 108579336 14469 - protein coding gene PRP38 pre-mRNA processing factor 38 (yeast) domain containing A
Cpgi14561 4 108578805 to 108579875 1070 CpG island CpG island 14561
Tssr42728 4 108579096 to 108579107 11 - TSS region transcription start site region 42728
Tssr42729 4 108579109 to 108579151 42 - TSS region transcription start site region 42729
Tssr42730 4 108579174 to 108579188 14 - TSS region transcription start site region 42730
Tssr42731 4 108579248 to 108579308 60 - TSS region transcription start site region 42731
Tssr42732 4 108579321 to 108579329 8 - TSS region transcription start site region 42732
Tssr42733 4 108579330 to 108579352 22 - TSS region transcription start site region 42733
Tssr38304 4 108579418 to 108579427 9 + TSS region transcription start site region 38304
Orc1 4 108579423 to 108614833 35410 + protein coding gene origin recognition complex, subunit 1
Tssr38305 4 108579445 to 108579470 25 + TSS region transcription start site region 38305
Tssr38306 4 108579481 to 108579489 8 + TSS region transcription start site region 38306
Gm12743 4 108592425 to 108619849 27424 - unclassified non-coding RNA gene predicted gene 12743