Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:108074724-108456096

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47 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Scp2 4 108043830 to 108144971 101141 - protein coding gene sterol carrier protein 2, liver
Tssr42710 4 108080767 to 108080809 42 - TSS region transcription start site region 42710
Mir6397 4 108087357 to 108087449 92 + miRNA gene microRNA 6397
Tssr1255 4 108101511 to 108101516 5 + TSS region transcription start site region 1255
Tssr42711 4 108105146 to 108105159 13 - TSS region transcription start site region 42711
Cpgi14552 4 108118195 to 108118758 563 CpG island CpG island 14552
Tssr42712 4 108118470 to 108118498 28 - TSS region transcription start site region 42712
Tssr42713 4 108118505 to 108118521 16 - TSS region transcription start site region 42713
Tssr42714 4 108118528 to 108118553 25 - TSS region transcription start site region 42714
Tssr42715 4 108118733 to 108118779 46 - TSS region transcription start site region 42715
Tssr42716 4 108144952 to 108144984 32 - TSS region transcription start site region 42716
Tssr42717 4 108144986 to 108145020 34 - TSS region transcription start site region 42717
Cpgi14553 4 108165239 to 108165814 575 CpG island CpG island 14553
Tssr38285 4 108165432 to 108165441 9 + TSS region transcription start site region 38285
Echdc2 4 108165437 to 108179308 13871 + protein coding gene enoyl Coenzyme A hydratase domain containing 2
Tssr38286 4 108165449 to 108165524 75 + TSS region transcription start site region 38286
Tssr38287 4 108170138 to 108170142 4 + TSS region transcription start site region 38287
Zyg11a 4 108181738 to 108218048 36310 - protein coding gene zyg-11 family member A, cell cycle regulator
Cpgi14554 4 108217242 to 108218238 996 CpG island CpG island 14554
Gm40222 4 108217980 to 108220462 2482 + lncRNA gene predicted gene, 40222
Tssr42718 4 108218007 to 108218048 41 - TSS region transcription start site region 42718
Tssr42719 4 108225328 to 108225336 8 - TSS region transcription start site region 42719
Tssr42720 4 108225379 to 108225388 9 - TSS region transcription start site region 42720
Zyg11b 4 108229724 to 108301096 71372 - protein coding gene zyg-ll family member B, cell cycle regulator
Tssr42721 4 108296555 to 108296559 4 - TSS region transcription start site region 42721
Cpgi14555 4 108300447 to 108301269 822 CpG island CpG island 14555
Tssr42722 4 108301045 to 108301107 62 - TSS region transcription start site region 42722
Tssr42723 4 108301114 to 108301125 11 - TSS region transcription start site region 42723
Tssr38288 4 108301315 to 108301327 12 + TSS region transcription start site region 38288
Gm12742 4 108310356 to 108311151 795 - pseudogene predicted gene 12742
Gm12740 4 108322338 to 108322645 307 + pseudogene predicted gene 12740
Cpgi14556 4 108328012 to 108328562 550 CpG island CpG island 14556
Tssr38289 4 108328136 to 108328180 44 + TSS region transcription start site region 38289
Coa7 4 108328152 to 108340718 12566 + protein coding gene cytochrome c oxidase assembly factor 7
Gm46889 4 108345493 to 108351197 5704 - lncRNA gene predicted gene, 46889
Cpgi14557 4 108360144 to 108360418 274 CpG island CpG island 14557
Shisal2a 4 108367777 to 108383349 15572 - protein coding gene shisa like 2A
Cpgi14558 4 108383040 to 108383914 874 CpG island CpG island 14558
Gm32297 4 108383295 to 108406608 23313 + lncRNA gene predicted gene, 32297
Tssr38290 4 108391449 to 108391461 12 + TSS region transcription start site region 38290
Gpx7 4 108400217 to 108406713 6496 - protein coding gene glutathione peroxidase 7
Cpgi14559 4 108406208 to 108406903 695 CpG island CpG island 14559
Tssr42724 4 108406676 to 108406745 69 - TSS region transcription start site region 42724
Gm40223 4 108430637 to 108454167 23530 + lncRNA gene predicted gene, 40223
Tssr38291 4 108431375 to 108431382 7 + TSS region transcription start site region 38291
Gm12738 4 108450807 to 108451342 535 - pseudogene predicted gene 12738
Tssr42725 4 108451362 to 108451371 9 - TSS region transcription start site region 42725