Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:107947069-108117098

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27 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm40221 4 107937471 to 107947374 9903 + lncRNA gene predicted gene, 40221
Tssr38281 4 107953907 to 107953940 33 + TSS region transcription start site region 38281
4930407G08Rik 4 107953932 to 107960721 6789 + lincRNA gene RIKEN cDNA 4930407G08 gene
Slc1a7 4 107968334 to 108013532 45198 + protein coding gene solute carrier family 1 (glutamate transporter), member 7
Tssr38282 4 107968400 to 107968424 24 + TSS region transcription start site region 38282
Tssr38283 4 107968434 to 107968446 12 + TSS region transcription start site region 38283
Tssr38284 4 107968602 to 107968645 43 + TSS region transcription start site region 38284
Tssr1254 4 107981687 to 107981692 5 + TSS region transcription start site region 1254
Podn 4 108014793 to 108032090 17297 - protein coding gene podocan
Cpgi14549 4 108021184 to 108021620 436 CpG island CpG island 14549
Tssr42701 4 108027307 to 108027343 36 - TSS region transcription start site region 42701
Cpgi14550 4 108030993 to 108032579 1586 CpG island CpG island 14550
Tssr42702 4 108031894 to 108031905 11 - TSS region transcription start site region 42702
Tssr42703 4 108031938 to 108031961 23 - TSS region transcription start site region 42703
Tssr42704 4 108032069 to 108032098 29 - TSS region transcription start site region 42704
Gm23354 4 108041697 to 108041800 103 - snRNA gene predicted gene, 23354
Scp2 4 108043830 to 108144971 101141 - protein coding gene sterol carrier protein 2, liver
Tssr42705 4 108051877 to 108051918 41 - TSS region transcription start site region 42705
Tssr42706 4 108069964 to 108069968 4 - TSS region transcription start site region 42706
Cpgi14551 4 108071304 to 108071624 320 CpG island CpG island 14551
Tssr42707 4 108071327 to 108071408 81 - TSS region transcription start site region 42707
Tssr42708 4 108071643 to 108071652 9 - TSS region transcription start site region 42708
Tssr42709 4 108074461 to 108074476 15 - TSS region transcription start site region 42709
Tssr42710 4 108080767 to 108080809 42 - TSS region transcription start site region 42710
Mir6397 4 108087357 to 108087449 92 + miRNA gene microRNA 6397
Tssr1255 4 108101511 to 108101516 5 + TSS region transcription start site region 1255
Tssr42711 4 108105146 to 108105159 13 - TSS region transcription start site region 42711