Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 4:107589600-107844284

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44 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Glis1 4 107434591 to 107635061 200470 + protein coding gene GLIS family zinc finger 1
4930552P06Rik 4 107595035 to 107597355 2320 - lncRNA gene RIKEN cDNA 4930552P06 gene
Gm52673 4 107624652 to 107626035 1383 - lncRNA gene predicted gene, 52673
Dmrtb1 4 107676290 to 107684230 7940 - protein coding gene DMRT-like family B with proline-rich C-terminal, 1
Tssr42684 4 107679380 to 107679395 15 - TSS region transcription start site region 42684
Tssr38259 4 107679421 to 107679439 18 + TSS region transcription start site region 38259
Tssr42685 4 107680741 to 107680770 29 - TSS region transcription start site region 42685
Tssr42686 4 107680771 to 107680847 76 - TSS region transcription start site region 42686
Tssr42687 4 107680850 to 107680871 21 - TSS region transcription start site region 42687
Tssr42688 4 107680875 to 107680887 12 - TSS region transcription start site region 42688
Tssr42689 4 107680903 to 107680942 39 - TSS region transcription start site region 42689
Tssr42690 4 107680958 to 107680985 27 - TSS region transcription start site region 42690
Cpgi14543 4 107683484 to 107684257 773 CpG island CpG island 14543
Tssr42691 4 107683530 to 107683574 44 - TSS region transcription start site region 42691
Tssr42692 4 107683576 to 107683592 16 - TSS region transcription start site region 42692
Tssr42693 4 107684228 to 107684231 3 - TSS region transcription start site region 42693
Gm12899 4 107688128 to 107688678 550 + pseudogene predicted gene 12899
Tssr38260 4 107688489 to 107688493 4 + TSS region transcription start site region 38260
1700047F07Rik 4 107689600 to 107744284 54684 + lncRNA gene RIKEN cDNA 1700047F07 gene
Gm25123 4 107697834 to 107697954 120 - miRNA gene predicted gene, 25123
Tssr38261 4 107707030 to 107707048 18 + TSS region transcription start site region 38261
Tssr38262 4 107707056 to 107707062 6 + TSS region transcription start site region 38262
Tssr38263 4 107707066 to 107707072 6 + TSS region transcription start site region 38263
Tssr38264 4 107707076 to 107707079 3 + TSS region transcription start site region 38264
Tssr38265 4 107707094 to 107707099 5 + TSS region transcription start site region 38265
D4Mit43 4 107733471 to 107733584 113 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 43
Cmmm 4 107733471 to 107733584 113 QTL carcinoma modifier of MSM
Gm12906 4 107760025 to 107760465 440 - pseudogene predicted gene 12906
Gm12907 4 107765080 to 107770601 5521 + lncRNA gene predicted gene 12907
Tssr38266 4 107783701 to 107783720 19 + TSS region transcription start site region 38266
4933424M12Rik 4 107783720 to 107789921 6201 + lncRNA gene RIKEN cDNA 4933424M12 gene
Lrp8os3 4 107793161 to 107802064 8903 - bidirectional promoter lncRNA gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 3
Cpgi14544 4 107801600 to 107804168 2568 CpG island CpG island 14544
Lrp8 4 107802200 to 107876840 74640 + protein coding gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
Tssr38267 4 107802210 to 107802272 62 + TSS region transcription start site region 38267
Tssr38268 4 107802281 to 107802297 16 + TSS region transcription start site region 38268
Tssr42694 4 107803365 to 107803369 4 - TSS region transcription start site region 42694
Tssr42695 4 107803381 to 107803392 11 - TSS region transcription start site region 42695
Tssr42696 4 107803674 to 107803697 23 - TSS region transcription start site region 42696
Lrp8os2 4 107806033 to 107823022 16989 - antisense lncRNA gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 2
Tssr38269 4 107812254 to 107812258 4 + TSS region transcription start site region 38269
Lrp8os1 4 107827896 to 107830844 2948 - antisense lncRNA gene low density lipoprotein receptor-related protein 8, apolipoprotein e receptor, opposite strand 1
Tssr38270 4 107830949 to 107830957 8 + TSS region transcription start site region 38270
Tssr38271 4 107830958 to 107830967 9 + TSS region transcription start site region 38271