Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:107138004-107369214

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65 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tceanc2 4 107134162 to 107178366 44204 - protein coding gene transcription elongation factor A (SII) N-terminal and central domain containing 2
Tssr42665 4 107177623 to 107177634 11 - TSS region transcription start site region 42665
Tssr42666 4 107177699 to 107177712 13 - TSS region transcription start site region 42666
Tssr42667 4 107177713 to 107177723 10 - TSS region transcription start site region 42667
Tssr42668 4 107177728 to 107177735 7 - TSS region transcription start site region 42668
Tssr42669 4 107177756 to 107177772 16 - TSS region transcription start site region 42669
Tssr42670 4 107177782 to 107177803 21 - TSS region transcription start site region 42670
Tssr42671 4 107177806 to 107177848 42 - TSS region transcription start site region 42671
Cpgi14537 4 107178160 to 107179463 1303 CpG island CpG island 14537
Tssr42672 4 107178296 to 107178338 42 - TSS region transcription start site region 42672
Tssr42673 4 107178340 to 107178355 15 - TSS region transcription start site region 42673
Tssr42674 4 107178360 to 107178373 13 - TSS region transcription start site region 42674
Tssr1252 4 107178369 to 107178417 48 + TSS region transcription start site region 1252
Tssr38222 4 107178418 to 107178466 48 + TSS region transcription start site region 38222
Tmem59 4 107178630 to 107200996 22366 + protein coding gene transmembrane protein 59
Tssr38223 4 107178660 to 107178671 11 + TSS region transcription start site region 38223
Tssr38224 4 107178686 to 107178723 37 + TSS region transcription start site region 38224
Tssr42675 4 107179316 to 107179326 10 - TSS region transcription start site region 42675
Tssr38225 4 107179856 to 107179860 4 + TSS region transcription start site region 38225
Tssr38226 4 107200352 to 107200363 11 + TSS region transcription start site region 38226
Tssr38227 4 107200572 to 107200609 37 + TSS region transcription start site region 38227
Tssr38228 4 107200631 to 107200735 104 + TSS region transcription start site region 38228
Tssr38229 4 107200756 to 107200778 22 + TSS region transcription start site region 38229
Tssr38230 4 107200802 to 107200818 16 + TSS region transcription start site region 38230
Tssr38231 4 107209138 to 107209159 21 + TSS region transcription start site region 38231
Ldlrad1 4 107209180 to 107218060 8880 + protein coding gene low density lipoprotein receptor class A domain containing 1
Lrrc42 4 107233514 to 107253532 20018 - protein coding gene leucine rich repeat containing 42
Tssr42676 4 107239279 to 107239283 4 - TSS region transcription start site region 42676
Cpgi14538 4 107253004 to 107254214 1210 CpG island CpG island 14538
Tssr1253 4 107253228 to 107253242 14 + TSS region transcription start site region 1253
Tssr38232 4 107253255 to 107253280 25 + TSS region transcription start site region 38232
Tssr42677 4 107253327 to 107253356 29 - TSS region transcription start site region 42677
Tssr42678 4 107253363 to 107253377 14 - TSS region transcription start site region 42678
Tssr42679 4 107253388 to 107253406 18 - TSS region transcription start site region 42679
Tssr42680 4 107253441 to 107253491 50 - TSS region transcription start site region 42680
Tssr42681 4 107253513 to 107253524 11 - TSS region transcription start site region 42681
Hspb11 4 107253593 to 107279938 26345 + protein coding gene heat shock protein family B (small), member 11
Tssr38233 4 107253887 to 107253902 15 + TSS region transcription start site region 38233
Tssr38234 4 107253912 to 107253918 6 + TSS region transcription start site region 38234
Tssr38235 4 107253919 to 107253939 20 + TSS region transcription start site region 38235
Tssr38236 4 107257118 to 107257122 4 + TSS region transcription start site region 38236
Tssr38237 4 107262365 to 107262423 58 + TSS region transcription start site region 38237
Gm12850 4 107270434 to 107270869 435 + pseudogene predicted gene 12850
Dio1 4 107291465 to 107307168 15703 - protein coding gene deiodinase, iodothyronine, type I
Tssr38238 4 107291841 to 107291853 12 + TSS region transcription start site region 38238
Tssr42682 4 107307128 to 107307161 33 - TSS region transcription start site region 42682
Cpgi14539 4 107314161 to 107314464 303 CpG island CpG island 14539
Tssr38239 4 107314351 to 107314362 11 + TSS region transcription start site region 38239
Yipf1 4 107314363 to 107359823 45460 + protein coding gene Yip1 domain family, member 1
Tssr38240 4 107314363 to 107314397 34 + TSS region transcription start site region 38240
Tssr38241 4 107314399 to 107314424 25 + TSS region transcription start site region 38241
Gm12870 4 107327484 to 107328499 1015 - pseudogene predicted gene 12870
Tssr38242 4 107347418 to 107347443 25 + TSS region transcription start site region 38242
Gm12869 4 107349039 to 107351353 2314 - antisense lncRNA gene predicted gene 12869
Tssr38243 4 107356668 to 107356685 17 + TSS region transcription start site region 38243
Tssr38244 4 107357759 to 107357783 24 + TSS region transcription start site region 38244
Cpgi14540 4 107367597 to 107368393 796 CpG island CpG island 14540
Tssr38245 4 107367729 to 107367754 25 + TSS region transcription start site region 38245
Tssr38246 4 107367757 to 107367813 56 + TSS region transcription start site region 38246
Ndc1 4 107367784 to 107416346 48562 + protein coding gene NDC1 transmembrane nucleoporin
Tssr38247 4 107368004 to 107368038 34 + TSS region transcription start site region 38247
Tssr38248 4 107368039 to 107368057 18 + TSS region transcription start site region 38248
Tssr38249 4 107368061 to 107368072 11 + TSS region transcription start site region 38249
Tssr38250 4 107368075 to 107368084 9 + TSS region transcription start site region 38250
Tssr38251 4 107368321 to 107368340 19 + TSS region transcription start site region 38251