Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:107034162-107278366

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74 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ssbp3 4 106911470 to 107049694 138224 + protein coding gene single-stranded DNA binding protein 3
Tssr38207 4 107036114 to 107036125 11 + TSS region transcription start site region 38207
Tssr38208 4 107036133 to 107036152 19 + TSS region transcription start site region 38208
Tssr38209 4 107047431 to 107047437 6 + TSS region transcription start site region 38209
Tssr38210 4 107048144 to 107048182 38 + TSS region transcription start site region 38210
Tssr38211 4 107048433 to 107048448 15 + TSS region transcription start site region 38211
Tssr38212 4 107050084 to 107050088 4 + TSS region transcription start site region 38212
Mrpl37 4 107055874 to 107066866 10992 - protein coding gene mitochondrial ribosomal protein L37
Tssr42657 4 107057453 to 107057495 42 - TSS region transcription start site region 42657
Tssr42658 4 107057502 to 107057520 18 - TSS region transcription start site region 42658
Tssr42659 4 107058864 to 107058876 12 - TSS region transcription start site region 42659
Tssr42660 4 107058913 to 107058922 9 - TSS region transcription start site region 42660
Tssr42661 4 107058923 to 107058929 6 - TSS region transcription start site region 42661
Tssr42662 4 107064718 to 107064729 11 - TSS region transcription start site region 42662
Cpgi14536 4 107066282 to 107067625 1343 CpG island CpG island 14536
Tssr42663 4 107066837 to 107066866 29 - TSS region transcription start site region 42663
Cyb5rl 4 107066910 to 107087993 21083 + protein coding gene cytochrome b5 reductase-like
Tssr38213 4 107066985 to 107067007 22 + TSS region transcription start site region 38213
Tssr38214 4 107067012 to 107067027 15 + TSS region transcription start site region 38214
Cdcp2 4 107096891 to 107107748 10857 + protein coding gene CUB domain containing protein 2
Tssr38215 4 107097597 to 107097603 6 + TSS region transcription start site region 38215
Stheal4 4 107112430 to 107112550 120 QTL soft tissue heal 4
D4Mit31 4 107112430 to 107112550 120 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 31
Gm12802 4 107126613 to 107136252 9639 + antisense lncRNA gene predicted gene 12802
Tssr38216 4 107126617 to 107126622 5 + TSS region transcription start site region 38216
Tssr38217 4 107126672 to 107126689 17 + TSS region transcription start site region 38217
Tssr38218 4 107126698 to 107126716 18 + TSS region transcription start site region 38218
Tssr38219 4 107127027 to 107127030 3 + TSS region transcription start site region 38219
Tssr38220 4 107127945 to 107127949 4 + TSS region transcription start site region 38220
Tceanc2 4 107134162 to 107178366 44204 - protein coding gene transcription elongation factor A (SII) N-terminal and central domain containing 2
Tssr42664 4 107135047 to 107135050 3 - TSS region transcription start site region 42664
Tssr38221 4 107135131 to 107135135 4 + TSS region transcription start site region 38221
Tssr42665 4 107177623 to 107177634 11 - TSS region transcription start site region 42665
Tssr42666 4 107177699 to 107177712 13 - TSS region transcription start site region 42666
Tssr42667 4 107177713 to 107177723 10 - TSS region transcription start site region 42667
Tssr42668 4 107177728 to 107177735 7 - TSS region transcription start site region 42668
Tssr42669 4 107177756 to 107177772 16 - TSS region transcription start site region 42669
Tssr42670 4 107177782 to 107177803 21 - TSS region transcription start site region 42670
Tssr42671 4 107177806 to 107177848 42 - TSS region transcription start site region 42671
Cpgi14537 4 107178160 to 107179463 1303 CpG island CpG island 14537
Tssr42672 4 107178296 to 107178338 42 - TSS region transcription start site region 42672
Tssr42673 4 107178340 to 107178355 15 - TSS region transcription start site region 42673
Tssr42674 4 107178360 to 107178373 13 - TSS region transcription start site region 42674
Tssr1252 4 107178369 to 107178417 48 + TSS region transcription start site region 1252
Tssr38222 4 107178418 to 107178466 48 + TSS region transcription start site region 38222
Tmem59 4 107178630 to 107200996 22366 + protein coding gene transmembrane protein 59
Tssr38223 4 107178660 to 107178671 11 + TSS region transcription start site region 38223
Tssr38224 4 107178686 to 107178723 37 + TSS region transcription start site region 38224
Tssr42675 4 107179316 to 107179326 10 - TSS region transcription start site region 42675
Tssr38225 4 107179856 to 107179860 4 + TSS region transcription start site region 38225
Tssr38226 4 107200352 to 107200363 11 + TSS region transcription start site region 38226
Tssr38227 4 107200572 to 107200609 37 + TSS region transcription start site region 38227
Tssr38228 4 107200631 to 107200735 104 + TSS region transcription start site region 38228
Tssr38229 4 107200756 to 107200778 22 + TSS region transcription start site region 38229
Tssr38230 4 107200802 to 107200818 16 + TSS region transcription start site region 38230
Tssr38231 4 107209138 to 107209159 21 + TSS region transcription start site region 38231
Ldlrad1 4 107209180 to 107218060 8880 + protein coding gene low density lipoprotein receptor class A domain containing 1
Lrrc42 4 107233514 to 107253532 20018 - protein coding gene leucine rich repeat containing 42
Tssr42676 4 107239279 to 107239283 4 - TSS region transcription start site region 42676
Cpgi14538 4 107253004 to 107254214 1210 CpG island CpG island 14538
Tssr1253 4 107253228 to 107253242 14 + TSS region transcription start site region 1253
Tssr38232 4 107253255 to 107253280 25 + TSS region transcription start site region 38232
Tssr42677 4 107253327 to 107253356 29 - TSS region transcription start site region 42677
Tssr42678 4 107253363 to 107253377 14 - TSS region transcription start site region 42678
Tssr42679 4 107253388 to 107253406 18 - TSS region transcription start site region 42679
Tssr42680 4 107253441 to 107253491 50 - TSS region transcription start site region 42680
Tssr42681 4 107253513 to 107253524 11 - TSS region transcription start site region 42681
Hspb11 4 107253593 to 107279938 26345 + protein coding gene heat shock protein family B (small), member 11
Tssr38233 4 107253887 to 107253902 15 + TSS region transcription start site region 38233
Tssr38234 4 107253912 to 107253918 6 + TSS region transcription start site region 38234
Tssr38235 4 107253919 to 107253939 20 + TSS region transcription start site region 38235
Tssr38236 4 107257118 to 107257122 4 + TSS region transcription start site region 38236
Tssr38237 4 107262365 to 107262423 58 + TSS region transcription start site region 38237
Gm12850 4 107270434 to 107270869 435 + pseudogene predicted gene 12850