Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:106794587-106924596

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33 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acot11 4 106744555 to 106804998 60443 - protein coding gene acyl-CoA thioesterase 11
Tssr42644 4 106799737 to 106799750 13 - TSS region transcription start site region 42644
Tssr42645 4 106799779 to 106799840 61 - TSS region transcription start site region 42645
Tssr42646 4 106800291 to 106800303 12 - TSS region transcription start site region 42646
Cpgi14531 4 106804841 to 106805200 359 CpG island CpG island 14531
Tssr42647 4 106805085 to 106805099 14 - TSS region transcription start site region 42647
Gm31065 4 106814909 to 106828344 13435 - lncRNA gene predicted gene, 31065
Cpgi14532 4 106827583 to 106828458 875 CpG island CpG island 14532
Tssr38190 4 106836900 to 106836905 5 + TSS region transcription start site region 38190
Cpgi14533 4 106837943 to 106838252 309 CpG island CpG island 14533
Cpgi14534 4 106838834 to 106840612 1778 CpG island CpG island 14534
Gm31125 4 106839278 to 106840161 883 - lncRNA gene predicted gene, 31125
Tssr42648 4 106840021 to 106840050 29 - TSS region transcription start site region 42648
Tssr38191 4 106840207 to 106840246 39 + TSS region transcription start site region 38191
Gm12746 4 106841761 to 106847920 6159 - lincRNA gene predicted gene 12746
Tssr42649 4 106855136 to 106855162 26 - TSS region transcription start site region 42649
Tssr42650 4 106855830 to 106855842 12 - TSS region transcription start site region 42650
Tssr42651 4 106859377 to 106859389 12 - TSS region transcription start site region 42651
Tssr42652 4 106859587 to 106859596 9 - TSS region transcription start site region 42652
Tssr42653 4 106859598 to 106859620 22 - TSS region transcription start site region 42653
Tssr38192 4 106859721 to 106859755 34 + TSS region transcription start site region 38192
Tssr42654 4 106865950 to 106865956 6 - TSS region transcription start site region 42654
Tssr38193 4 106867054 to 106867062 8 + TSS region transcription start site region 38193
Tssr38194 4 106867207 to 106867218 11 + TSS region transcription start site region 38194
Gm46865 4 106900213 to 106912896 12683 - lncRNA gene predicted gene, 46865
Tssr38195 4 106910428 to 106910434 6 + TSS region transcription start site region 38195
Cpgi14535 4 106910476 to 106912766 2290 CpG island CpG island 14535
Tssr42655 4 106911351 to 106911354 3 - TSS region transcription start site region 42655
Tssr38196 4 106911435 to 106911446 11 + TSS region transcription start site region 38196
Ssbp3 4 106911470 to 107049694 138224 + protein coding gene single-stranded DNA binding protein 3
Tssr38197 4 106911470 to 106911505 35 + TSS region transcription start site region 38197
Tssr38198 4 106911517 to 106911529 12 + TSS region transcription start site region 38198
Tssr38199 4 106923231 to 106923276 45 + TSS region transcription start site region 38199