Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:106762234-107132250

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71 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Acot11 4 106744555 to 106804998 60443 - protein coding gene acyl-CoA thioesterase 11
Gm12745 4 106774816 to 106775029 213 + pseudogene predicted gene 12745
Tssr42644 4 106799737 to 106799750 13 - TSS region transcription start site region 42644
Tssr42645 4 106799779 to 106799840 61 - TSS region transcription start site region 42645
Tssr42646 4 106800291 to 106800303 12 - TSS region transcription start site region 42646
Cpgi14531 4 106804841 to 106805200 359 CpG island CpG island 14531
Tssr42647 4 106805085 to 106805099 14 - TSS region transcription start site region 42647
Gm31065 4 106814909 to 106828344 13435 - lncRNA gene predicted gene, 31065
Cpgi14532 4 106827583 to 106828458 875 CpG island CpG island 14532
Tssr38190 4 106836900 to 106836905 5 + TSS region transcription start site region 38190
Cpgi14533 4 106837943 to 106838252 309 CpG island CpG island 14533
Cpgi14534 4 106838834 to 106840612 1778 CpG island CpG island 14534
Gm31125 4 106839278 to 106840161 883 - lncRNA gene predicted gene, 31125
Tssr42648 4 106840021 to 106840050 29 - TSS region transcription start site region 42648
Tssr38191 4 106840207 to 106840246 39 + TSS region transcription start site region 38191
Gm12746 4 106841761 to 106847920 6159 - lincRNA gene predicted gene 12746
Tssr42649 4 106855136 to 106855162 26 - TSS region transcription start site region 42649
Tssr42650 4 106855830 to 106855842 12 - TSS region transcription start site region 42650
Tssr42651 4 106859377 to 106859389 12 - TSS region transcription start site region 42651
Tssr42652 4 106859587 to 106859596 9 - TSS region transcription start site region 42652
Tssr42653 4 106859598 to 106859620 22 - TSS region transcription start site region 42653
Tssr38192 4 106859721 to 106859755 34 + TSS region transcription start site region 38192
Tssr42654 4 106865950 to 106865956 6 - TSS region transcription start site region 42654
Tssr38193 4 106867054 to 106867062 8 + TSS region transcription start site region 38193
Tssr38194 4 106867207 to 106867218 11 + TSS region transcription start site region 38194
Gm46865 4 106900213 to 106912896 12683 - lncRNA gene predicted gene, 46865
Tssr38195 4 106910428 to 106910434 6 + TSS region transcription start site region 38195
Cpgi14535 4 106910476 to 106912766 2290 CpG island CpG island 14535
Tssr42655 4 106911351 to 106911354 3 - TSS region transcription start site region 42655
Tssr38196 4 106911435 to 106911446 11 + TSS region transcription start site region 38196
Tssr38197 4 106911470 to 106911505 35 + TSS region transcription start site region 38197
Ssbp3 4 106911470 to 107049694 138224 + protein coding gene single-stranded DNA binding protein 3
Tssr38198 4 106911517 to 106911529 12 + TSS region transcription start site region 38198
Tssr38199 4 106923231 to 106923276 45 + TSS region transcription start site region 38199
Tssr38200 4 106937321 to 106937325 4 + TSS region transcription start site region 38200
Tssr38201 4 106947234 to 106947250 16 + TSS region transcription start site region 38201
Tssr42656 4 106947904 to 106947910 6 - TSS region transcription start site region 42656
Tssr38202 4 106949421 to 106949430 9 + TSS region transcription start site region 38202
Tssr38203 4 106953513 to 106953517 4 + TSS region transcription start site region 38203
Tssr38204 4 107002593 to 107002628 35 + TSS region transcription start site region 38204
Tssr38205 4 107002713 to 107002726 13 + TSS region transcription start site region 38205
Tssr38206 4 107009700 to 107009726 26 + TSS region transcription start site region 38206
Gm12786 4 107017935 to 107022499 4564 - antisense lncRNA gene predicted gene 12786
Tssr38207 4 107036114 to 107036125 11 + TSS region transcription start site region 38207
Tssr38208 4 107036133 to 107036152 19 + TSS region transcription start site region 38208
Tssr38209 4 107047431 to 107047437 6 + TSS region transcription start site region 38209
Tssr38210 4 107048144 to 107048182 38 + TSS region transcription start site region 38210
Tssr38211 4 107048433 to 107048448 15 + TSS region transcription start site region 38211
Tssr38212 4 107050084 to 107050088 4 + TSS region transcription start site region 38212
Mrpl37 4 107055874 to 107066866 10992 - protein coding gene mitochondrial ribosomal protein L37
Tssr42657 4 107057453 to 107057495 42 - TSS region transcription start site region 42657
Tssr42658 4 107057502 to 107057520 18 - TSS region transcription start site region 42658
Tssr42659 4 107058864 to 107058876 12 - TSS region transcription start site region 42659
Tssr42660 4 107058913 to 107058922 9 - TSS region transcription start site region 42660
Tssr42661 4 107058923 to 107058929 6 - TSS region transcription start site region 42661
Tssr42662 4 107064718 to 107064729 11 - TSS region transcription start site region 42662
Cpgi14536 4 107066282 to 107067625 1343 CpG island CpG island 14536
Tssr42663 4 107066837 to 107066866 29 - TSS region transcription start site region 42663
Cyb5rl 4 107066910 to 107087993 21083 + protein coding gene cytochrome b5 reductase-like
Tssr38213 4 107066985 to 107067007 22 + TSS region transcription start site region 38213
Tssr38214 4 107067012 to 107067027 15 + TSS region transcription start site region 38214
Cdcp2 4 107096891 to 107107748 10857 + protein coding gene CUB domain containing protein 2
Tssr38215 4 107097597 to 107097603 6 + TSS region transcription start site region 38215
Stheal4 4 107112430 to 107112550 120 QTL soft tissue heal 4
D4Mit31 4 107112430 to 107112550 120 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 31
Gm12802 4 107126613 to 107136252 9639 + antisense lncRNA gene predicted gene 12802
Tssr38216 4 107126617 to 107126622 5 + TSS region transcription start site region 38216
Tssr38217 4 107126672 to 107126689 17 + TSS region transcription start site region 38217
Tssr38218 4 107126698 to 107126716 18 + TSS region transcription start site region 38218
Tssr38219 4 107127027 to 107127030 3 + TSS region transcription start site region 38219
Tssr38220 4 107127945 to 107127949 4 + TSS region transcription start site region 38220