Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:102829594-103149632

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70 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sgip1 4 102759162 to 102977426 218264 + protein coding gene SH3-domain GRB2-like (endophilin) interacting protein 1
Tssr38073 4 102833677 to 102833679 2 + TSS region transcription start site region 38073
Tssr42569 4 102859352 to 102859392 40 - TSS region transcription start site region 42569
Tssr42570 4 102921771 to 102921780 9 - TSS region transcription start site region 42570
Tssr42571 4 102921783 to 102921790 7 - TSS region transcription start site region 42571
Bbaa23 4 102923970 to 102924082 112 QTL B.burgdorferi-associated arthritis 23
Papg1 4 102923970 to 102924082 112 QTL pulmonary adenoma progression 1
D4Mit219 4 102923970 to 102924082 112 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 219
Tssr1245 4 102955811 to 102955818 7 + TSS region transcription start site region 1245
Tssr42572 4 102959665 to 102959673 8 - TSS region transcription start site region 42572
Gm12709 4 102967266 to 102989755 22489 - antisense lncRNA gene predicted gene 12709
Tssr38074 4 102969073 to 102969076 3 + TSS region transcription start site region 38074
Tssr1246 4 102976124 to 102976154 30 + TSS region transcription start site region 1246
Tctex1d1 4 102978606 to 103005594 26988 + protein coding gene Tctex1 domain containing 1
Tssr38075 4 102978691 to 102978713 22 + TSS region transcription start site region 38075
Tssr42573 4 102984208 to 102984219 11 - TSS region transcription start site region 42573
Tssr38076 4 102986343 to 102986395 52 + TSS region transcription start site region 38076
Tssr1247 4 102986400 to 102986409 9 + TSS region transcription start site region 1247
Tssr42574 4 102989471 to 102989477 6 - TSS region transcription start site region 42574
Tssr42575 4 102989535 to 102989545 10 - TSS region transcription start site region 42575
Tssr38077 4 102989594 to 102989632 38 + TSS region transcription start site region 38077
Tssr42576 4 102989630 to 102989667 37 - TSS region transcription start site region 42576
Tssr38078 4 102991247 to 102991277 30 + TSS region transcription start site region 38078
Tssr38079 4 102991288 to 102991295 7 + TSS region transcription start site region 38079
Tssr38080 4 102991815 to 102991837 22 + TSS region transcription start site region 38080
Tssr38081 4 102991913 to 102991926 13 + TSS region transcription start site region 38081
BB031773 4 103004106 to 103011965 7859 - antisense lncRNA gene expressed sequence BB031773
Tssr42577 4 103011957 to 103011970 13 - TSS region transcription start site region 42577
Tssr42578 4 103012001 to 103012011 10 - TSS region transcription start site region 42578
Tssr42579 4 103012153 to 103012165 12 - TSS region transcription start site region 42579
Insl5 4 103017872 to 103026842 8970 - protein coding gene insulin-like 5
Tssr42580 4 103026649 to 103026667 18 - TSS region transcription start site region 42580
Tssr42581 4 103026709 to 103026752 43 - TSS region transcription start site region 42581
Wdr78 4 103038065 to 103114555 76490 - protein coding gene WD repeat domain 78
Tssr42582 4 103077649 to 103077667 18 - TSS region transcription start site region 42582
D4Mit118 4 103094710 to 103094901 191 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 118
Gm12710 4 103103527 to 103103742 215 + pseudogene predicted gene 12710
Cpgi14511 4 103113897 to 103115180 1283 CpG island CpG island 14511
Tssr42583 4 103114210 to 103114221 11 - TSS region transcription start site region 42583
Tssr42584 4 103114222 to 103114233 11 - TSS region transcription start site region 42584
Tssr42585 4 103114238 to 103114298 60 - TSS region transcription start site region 42585
Tssr42586 4 103114305 to 103114314 9 - TSS region transcription start site region 42586
Tssr42587 4 103114316 to 103114348 32 - TSS region transcription start site region 42587
Tssr42588 4 103114357 to 103114366 9 - TSS region transcription start site region 42588
Tssr38082 4 103114385 to 103114394 9 + TSS region transcription start site region 38082
Mier1 4 103114390 to 103165754 51364 + protein coding gene MEIR1 treanscription regulator
Tssr38083 4 103114402 to 103114445 43 + TSS region transcription start site region 38083
Tssr38084 4 103114462 to 103114475 13 + TSS region transcription start site region 38084
Tssr42589 4 103114562 to 103114578 16 - TSS region transcription start site region 42589
Tssr38085 4 103114712 to 103114759 47 + TSS region transcription start site region 38085
Tssr38086 4 103114776 to 103114792 16 + TSS region transcription start site region 38086
Tssr42590 4 103114812 to 103114836 24 - TSS region transcription start site region 42590
Tssr38087 4 103114916 to 103114983 67 + TSS region transcription start site region 38087
Tssr38088 4 103117219 to 103117251 32 + TSS region transcription start site region 38088
Cpgi14512 4 103118974 to 103120029 1055 CpG island CpG island 14512
Tssr38089 4 103119275 to 103119293 18 + TSS region transcription start site region 38089
Tssr38090 4 103119371 to 103119403 32 + TSS region transcription start site region 38090
Tssr38091 4 103119404 to 103119416 12 + TSS region transcription start site region 38091
Tssr38092 4 103119434 to 103119447 13 + TSS region transcription start site region 38092
Tssr38093 4 103119461 to 103119464 3 + TSS region transcription start site region 38093
Tssr38094 4 103119467 to 103119486 19 + TSS region transcription start site region 38094
Tssr1248 4 103119936 to 103119943 7 + TSS region transcription start site region 1248
Tssr42591 4 103120170 to 103120177 7 - TSS region transcription start site region 42591
Tssr42592 4 103120207 to 103120224 17 - TSS region transcription start site region 42592
Tssr38095 4 103120270 to 103120295 25 + TSS region transcription start site region 38095
Tssr38096 4 103123587 to 103123590 3 + TSS region transcription start site region 38096
Tssr38097 4 103133529 to 103133534 5 + TSS region transcription start site region 38097
Tssr38098 4 103134842 to 103134850 8 + TSS region transcription start site region 38098
D4Mit167 4 103135042 to 103135191 149 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 167
Tssr38099 4 103143052 to 103143071 19 + TSS region transcription start site region 38099