Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:102614352-103104392

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52 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr38062 4 102624951 to 102624969 18 + TSS region transcription start site region 38062
Tssr38063 4 102625147 to 102625162 15 + TSS region transcription start site region 38063
Tssr38064 4 102625197 to 102625208 11 + TSS region transcription start site region 38064
Tssr38065 4 102625330 to 102625342 12 + TSS region transcription start site region 38065
Tssr38066 4 102625420 to 102625459 39 + TSS region transcription start site region 38066
D4Mit359 4 102642790 to 102642903 113 DNA segment DNA Segment, Chr 4, Massachusetts Institute of Technology-359
Tssr38067 4 102698285 to 102698291 6 + TSS region transcription start site region 38067
Gm24869 4 102736812 to 102736939 127 + snoRNA gene predicted gene, 24869
Tssr38068 4 102741287 to 102741298 11 + TSS region transcription start site region 38068
Cpgi14509 4 102759103 to 102759565 462 CpG island CpG island 14509
Sgip1 4 102759162 to 102977426 218264 + protein coding gene SH3-domain GRB2-like (endophilin) interacting protein 1
Cpgi14510 4 102760044 to 102760486 442 CpG island CpG island 14510
Tssr38069 4 102760164 to 102760184 20 + TSS region transcription start site region 38069
Tssr38070 4 102760271 to 102760278 7 + TSS region transcription start site region 38070
Tssr38071 4 102760294 to 102760375 81 + TSS region transcription start site region 38071
Tssr38072 4 102825448 to 102825451 3 + TSS region transcription start site region 38072
Tssr38073 4 102833677 to 102833679 2 + TSS region transcription start site region 38073
Tssr42569 4 102859352 to 102859392 40 - TSS region transcription start site region 42569
Tssr42570 4 102921771 to 102921780 9 - TSS region transcription start site region 42570
Tssr42571 4 102921783 to 102921790 7 - TSS region transcription start site region 42571
Papg1 4 102923970 to 102924082 112 QTL pulmonary adenoma progression 1
D4Mit219 4 102923970 to 102924082 112 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 219
Bbaa23 4 102923970 to 102924082 112 QTL B.burgdorferi-associated arthritis 23
Tssr1245 4 102955811 to 102955818 7 + TSS region transcription start site region 1245
Tssr42572 4 102959665 to 102959673 8 - TSS region transcription start site region 42572
Gm12709 4 102967266 to 102989755 22489 - antisense lncRNA gene predicted gene 12709
Tssr38074 4 102969073 to 102969076 3 + TSS region transcription start site region 38074
Tssr1246 4 102976124 to 102976154 30 + TSS region transcription start site region 1246
Tctex1d1 4 102978606 to 103005594 26988 + protein coding gene Tctex1 domain containing 1
Tssr38075 4 102978691 to 102978713 22 + TSS region transcription start site region 38075
Tssr42573 4 102984208 to 102984219 11 - TSS region transcription start site region 42573
Tssr38076 4 102986343 to 102986395 52 + TSS region transcription start site region 38076
Tssr1247 4 102986400 to 102986409 9 + TSS region transcription start site region 1247
Tssr42574 4 102989471 to 102989477 6 - TSS region transcription start site region 42574
Tssr42575 4 102989535 to 102989545 10 - TSS region transcription start site region 42575
Tssr38077 4 102989594 to 102989632 38 + TSS region transcription start site region 38077
Tssr42576 4 102989630 to 102989667 37 - TSS region transcription start site region 42576
Tssr38078 4 102991247 to 102991277 30 + TSS region transcription start site region 38078
Tssr38079 4 102991288 to 102991295 7 + TSS region transcription start site region 38079
Tssr38080 4 102991815 to 102991837 22 + TSS region transcription start site region 38080
Tssr38081 4 102991913 to 102991926 13 + TSS region transcription start site region 38081
BB031773 4 103004106 to 103011965 7859 - antisense lncRNA gene expressed sequence BB031773
Tssr42577 4 103011957 to 103011970 13 - TSS region transcription start site region 42577
Tssr42578 4 103012001 to 103012011 10 - TSS region transcription start site region 42578
Tssr42579 4 103012153 to 103012165 12 - TSS region transcription start site region 42579
Insl5 4 103017872 to 103026842 8970 - protein coding gene insulin-like 5
Tssr42580 4 103026649 to 103026667 18 - TSS region transcription start site region 42580
Tssr42581 4 103026709 to 103026752 43 - TSS region transcription start site region 42581
Wdr78 4 103038065 to 103114555 76490 - protein coding gene WD repeat domain 78
Tssr42582 4 103077649 to 103077667 18 - TSS region transcription start site region 42582
D4Mit118 4 103094710 to 103094901 191 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 118
Gm12710 4 103103527 to 103103742 215 + pseudogene predicted gene 12710