Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:101417404-102115352

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64 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi14500 4 101419059 to 101420717 1658 CpG island CpG island 14500
Ak4 4 101419277 to 101466995 47718 + protein coding gene adenylate kinase 4
Tssr37989 4 101419301 to 101419332 31 + TSS region transcription start site region 37989
Tssr37990 4 101419335 to 101419349 14 + TSS region transcription start site region 37990
Tssr37991 4 101419359 to 101419378 19 + TSS region transcription start site region 37991
Tssr37992 4 101419696 to 101419732 36 + TSS region transcription start site region 37992
Tssr37993 4 101420153 to 101420196 43 + TSS region transcription start site region 37993
D4Ertd298e 4 101424788 to 101425037 249 DNA segment DNA segment, Chr 4, ERATO Doi 298, expressed
Tssr37994 4 101446797 to 101446803 6 + TSS region transcription start site region 37994
D4Mit176 4 101492003 to 101492140 137 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 176
D4Mit176.3 4 101492155 to 101492309 154 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 176.3
Cpgi14501 4 101496135 to 101497191 1056 CpG island CpG island 14501
Tssr37995 4 101496545 to 101496598 53 + TSS region transcription start site region 37995
Dnajc6 4 101496648 to 101642799 146151 + protein coding gene DnaJ heat shock protein family (Hsp40) member C6
Tssr37996 4 101496676 to 101496722 46 + TSS region transcription start site region 37996
Tssr37997 4 101507477 to 101507495 18 + TSS region transcription start site region 37997
Tssr37998 4 101507761 to 101507772 11 + TSS region transcription start site region 37998
Tssr37999 4 101507784 to 101507800 16 + TSS region transcription start site region 37999
Tssr38000 4 101507855 to 101507868 13 + TSS region transcription start site region 38000
Tssr38001 4 101507931 to 101507941 10 + TSS region transcription start site region 38001
Tssr38002 4 101507947 to 101508032 85 + TSS region transcription start site region 38002
Tssr38003 4 101508099 to 101508130 31 + TSS region transcription start site region 38003
Cpgi14502 4 101508894 to 101509246 352 CpG island CpG island 14502
Gm36012 4 101543298 to 101556812 13514 - lncRNA gene predicted gene, 36012
Cpgi14503 4 101549998 to 101551186 1188 CpG island CpG island 14503
Tssr38004 4 101550299 to 101550327 28 + TSS region transcription start site region 38004
Tssr38005 4 101550340 to 101550374 34 + TSS region transcription start site region 38005
Tssr38006 4 101550377 to 101550398 21 + TSS region transcription start site region 38006
Tssr38007 4 101550411 to 101550432 21 + TSS region transcription start site region 38007
Tssr38008 4 101550799 to 101550824 25 + TSS region transcription start site region 38008
Tssr42562 4 101551197 to 101551202 5 - TSS region transcription start site region 42562
Gm22533 4 101555095 to 101555368 273 + unclassified non-coding RNA gene predicted gene, 22533
Cpgi14504 4 101647118 to 101648153 1035 CpG island CpG island 14504
Tssr38009 4 101647676 to 101647711 35 + TSS region transcription start site region 38009
Tssr38010 4 101647712 to 101647736 24 + TSS region transcription start site region 38010
Tssr38011 4 101647742 to 101647762 20 + TSS region transcription start site region 38011
Tssr38012 4 101647763 to 101647797 34 + TSS region transcription start site region 38012
Leprot 4 101647783 to 101659358 11575 + protein coding gene leptin receptor overlapping transcript
Tssr38013 4 101656140 to 101656158 18 + TSS region transcription start site region 38013
Cpgi14505 4 101717132 to 101718168 1036 CpG island CpG island 14505
Lepr 4 101717404 to 101815352 97948 + protein coding gene leptin receptor
Dob1 4 101717404 to 123233418 21516014 QTL dietary obesity 1
Tssr38014 4 101717454 to 101717462 8 + TSS region transcription start site region 38014
Tssr38015 4 101717582 to 101717593 11 + TSS region transcription start site region 38015
Tssr38016 4 101717633 to 101717644 11 + TSS region transcription start site region 38016
Tssr38017 4 101717805 to 101717838 33 + TSS region transcription start site region 38017
Tssr38018 4 101717862 to 101717873 11 + TSS region transcription start site region 38018
Tssr38019 4 101717896 to 101717910 14 + TSS region transcription start site region 38019
Tssr1241 4 101728522 to 101728526 4 + TSS region transcription start site region 1241
Tssr38020 4 101776238 to 101776245 7 + TSS region transcription start site region 38020
B020004J07Rik 4 101834969 to 101844022 9053 - protein coding gene RIKEN cDNA B020004J07 gene
Gm12791 4 101875347 to 101876001 654 + pseudogene predicted gene 12791
Gm12797 4 101884040 to 101884312 272 + pseudogene predicted gene 12797
C130073F10Rik 4 101890024 to 101893788 3764 - protein coding gene RIKEN cDNA C130073F10 gene
Gm12792 4 101895967 to 101896982 1015 - pseudogene predicted gene 12792
Gm12800 4 101909121 to 101911908 2787 + protein coding gene predicted gene 12800
Gm12794 4 101940407 to 101943183 2776 + protein coding gene predicted gene 12794
Gm12790 4 101967453 to 101981049 13596 - protein coding gene predicted gene 12790
Gm12789 4 101986840 to 101990231 3391 + protein coding gene predicted gene 12789
Gm12799 4 102046568 to 102049127 2559 - pseudogene predicted gene 12799
Cpgi14506 4 102087308 to 102088353 1045 CpG island CpG island 14506
Pde4b 4 102087543 to 102607259 519716 + protein coding gene phosphodiesterase 4B, cAMP specific
Tssr38021 4 102087615 to 102087694 79 + TSS region transcription start site region 38021
Tssr38022 4 102087715 to 102087734 19 + TSS region transcription start site region 38022