Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:100121858-100551861

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18 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ror1 4 100095791 to 100444765 348974 + protein coding gene receptor tyrosine kinase-like orphan receptor 1
Tssr37959 4 100145075 to 100145081 6 + TSS region transcription start site region 37959
Tssr37960 4 100160125 to 100160129 4 + TSS region transcription start site region 37960
Tssr37961 4 100227730 to 100227731 1 + TSS region transcription start site region 37961
Tssr37962 4 100305654 to 100305659 5 + TSS region transcription start site region 37962
Tssr37963 4 100336858 to 100336861 3 + TSS region transcription start site region 37963
Gm12706 4 100361362 to 100362059 697 - pseudogene predicted gene 12706
Gm35760 4 100376583 to 100393210 16627 - lncRNA gene predicted gene, 35760
D4Mit175 4 100399497 to 100399607 110 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 175
Cpgi14493 4 100441519 to 100442023 504 CpG island CpG island 14493
Gm18288 4 100465875 to 100467142 1267 + pseudogene predicted gene, 18288
Tssr37964 4 100478795 to 100478802 7 + TSS region transcription start site region 37964
Tssr37965 4 100478806 to 100478872 66 + TSS region transcription start site region 37965
Ube2u 4 100478867 to 100550145 71278 + protein coding gene ubiquitin-conjugating enzyme E2U (putative)
Tssr37966 4 100479128 to 100479146 18 + TSS region transcription start site region 37966
Tssr37967 4 100479150 to 100479170 20 + TSS region transcription start site region 37967
Tssr37968 4 100479176 to 100479181 5 + TSS region transcription start site region 37968
Ube2uos 4 100523247 to 100527801 4554 - antisense lncRNA gene ubiquitin-conjugating enzyme E2U (putative), opposite strand