Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:9988277-10192562

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr28358	3	9988259 to 9988278	19	+	TSS region	transcription start site region 28358
Tssr819	3	9997552 to 9997566	14	+	TSS region	transcription start site region 819
Cpgi12979	3	10012184 to 10013433	1249		CpG island	CpG island 12979
Tssr28359	3	10012564 to 10012598	34	+	TSS region	transcription start site region 28359
Fabp5	3	10012585 to 10016610	4025	+	protein coding gene	fatty acid binding protein 5, epidermal
Tssr28360	3	10012611 to 10012622	11	+	TSS region	transcription start site region 28360
Tssr28361	3	10013215 to 10013263	48	+	TSS region	transcription start site region 28361
Tssr28362	3	10014510 to 10014513	3	+	TSS region	transcription start site region 28362
Gm38335	3	10022311 to 10025539	3228	-	lincRNA gene	predicted gene, 38335
Tssr32597	3	10022560 to 10022594	34	-	TSS region	transcription start site region 32597
Tssr32598	3	10025536 to 10025540	4	-	TSS region	transcription start site region 32598
Gm33365	3	10043293 to 10064335	21042	-	lncRNA gene	predicted gene, 33365
Cpgi12980	3	10087785 to 10088324	539		CpG island	CpG island 12980
Tssr28363	3	10088106 to 10088126	20	+	TSS region	transcription start site region 28363
Gm9833	3	10088277 to 10092562	4285	+	protein coding gene	predicted gene 9833
Gm37308	3	10089856 to 10089955	99	-	pseudogene	predicted gene, 37308
Tssr32599	3	10137460 to 10137493	33	-	TSS region	transcription start site region 32599
Pmp2	3	10179851 to 10183885	4034	-	protein coding gene	peripheral myelin protein 2
Gm37389	3	10179852 to 10197262	17410	-	protein coding gene	predicted gene, 37389
Tssr32600	3	10183923 to 10183927	4	-	TSS region	transcription start site region 32600
D3Mit130.3	3	10184028 to 10184179	151		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 130.3
W10q3	3	10184161 to 83277639	73093478		QTL	weight 10 weeks QTL 3
D3Mit130	3	10184161 to 10184285	124		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 130
Lvrq5	3	10184161 to 83277639	73093478		QTL	liver weight QTL 5
Lgaq4	3	10184161 to 83277639	73093478		QTL	late growth adjusted QTL 4
Hrtpq1	3	10184161 to 83277639	73093478		QTL	heart weight percentage QTL 1
Lgq3	3	10184161 to 83277639	73093478		QTL	late growth QTL 3
Splq6	3	10184161 to 83277639	73093478		QTL	spleen weight QTL 6
Tssr28364	3	10186688 to 10186691	3	+	TSS region	transcription start site region 28364