Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Hsd3b3 | 3 | 21604 | - | protein coding gene | hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3 | |
Tssr34704 | 3 | 12 | - | TSS region | transcription start site region 34704 | |
Tssr34705 | 3 | 21 | - | TSS region | transcription start site region 34705 | |
Hsd3b6 | 3 | 8939 | - | protein coding gene | hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6 | |
Tssr34706 | 3 | 15 | - | TSS region | transcription start site region 34706 | |
Gm12427 | 3 | 1937 | - | pseudogene | predicted gene 12427 | |
Cpgi13606 | 3 | 212 | CpG island | CpG island 13606 | ||
Gm12428 | 3 | 726 | + | pseudogene | predicted gene 12428 | |
Gm12431 | 3 | 167 | - | pseudogene | predicted gene 12431 | |
Gm12432 | 3 | 185 | - | pseudogene | predicted gene 12432 | |
Gm12433 | 3 | 254 | + | pseudogene | predicted gene 12433 | |
Hsd3b1 | 3 | 7600 | - | protein coding gene | hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 | |
Tssr30852 | 3 | 11 | + | TSS region | transcription start site region 30852 | |
Tssr30853 | 3 | 21 | + | TSS region | transcription start site region 30853 | |
Tssr34707 | 3 | 19 | - | TSS region | transcription start site region 34707 | |
Tssr34708 | 3 | 13 | - | TSS region | transcription start site region 34708 | |
Tssr34709 | 3 | 14 | - | TSS region | transcription start site region 34709 | |
Tssr34710 | 3 | 17 | - | TSS region | transcription start site region 34710 | |
Tssr34711 | 3 | 15 | - | TSS region | transcription start site region 34711 | |
Tssr979 | 3 | 1 | - | TSS region | transcription start site region 979 | |
Tssr34712 | 3 | 11 | - | TSS region | transcription start site region 34712 | |
Tssr34713 | 3 | 18 | - | TSS region | transcription start site region 34713 | |
Tssr34714 | 3 | 11 | - | TSS region | transcription start site region 34714 | |
Tssr34715 | 3 | 20 | - | TSS region | transcription start site region 34715 | |
Tssr34716 | 3 | 16 | - | TSS region | transcription start site region 34716 | |
Tssr34717 | 3 | 48 | - | TSS region | transcription start site region 34717 | |
Tssr34718 | 3 | 22 | - | TSS region | transcription start site region 34718 | |
Tssr34719 | 3 | 7 | - | TSS region | transcription start site region 34719 | |
Tssr980 | 3 | 4 | - | TSS region | transcription start site region 980 | |
Tssr34720 | 3 | 2 | - | TSS region | transcription start site region 34720 | |
Tssr981 | 3 | 1 | - | TSS region | transcription start site region 981 | |
Tssr34721 | 3 | 10 | - | TSS region | transcription start site region 34721 | |
Tssr34722 | 3 | 20 | - | TSS region | transcription start site region 34722 | |
Tssr34723 | 3 | 16 | - | TSS region | transcription start site region 34723 | |
Tssr34724 | 3 | 26 | - | TSS region | transcription start site region 34724 | |
Hao2 | 3 | 18718 | - | protein coding gene | hydroxyacid oxidase 2 | |
Tssr34725 | 3 | 20 | - | TSS region | transcription start site region 34725 | |
Tssr30854 | 3 | 4 | + | TSS region | transcription start site region 30854 | |
Tssr34726 | 3 | 18 | - | TSS region | transcription start site region 34726 | |
Tssr34727 | 3 | 33 | - | TSS region | transcription start site region 34727 | |
Tssr34728 | 3 | 15 | - | TSS region | transcription start site region 34728 | |
Tssr34729 | 3 | 11 | - | TSS region | transcription start site region 34729 | |
Tssr34730 | 3 | 5 | - | TSS region | transcription start site region 34730 | |
Tssr34731 | 3 | 6 | - | TSS region | transcription start site region 34731 | |
Tssr34732 | 3 | 28 | - | TSS region | transcription start site region 34732 | |
Tssr34733 | 3 | 11 | - | TSS region | transcription start site region 34733 | |
Tssr34734 | 3 | 10 | - | TSS region | transcription start site region 34734 | |
Tssr34735 | 3 | 11 | - | TSS region | transcription start site region 34735 | |
Tssr34736 | 3 | 36 | - | TSS region | transcription start site region 34736 | |
Gm31880 | 3 | 34699 | - | lncRNA gene | predicted gene, 31880 | |
5730437C11Rik | 3 | 3607 | - | lincRNA gene | RIKEN cDNA 5730437C11 gene | |
Cpgi13607 | 3 | 352 | CpG island | CpG island 13607 | ||
D3Mit190 | 3 | 135 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 190 | ||
Gm12440 | 3 | 3920 | + | lincRNA gene | predicted gene 12440 | |
Gm12441 | 3 | 487 | - | pseudogene | predicted gene 12441 | |
Gm40105 | 3 | 4736 | + | lncRNA gene | predicted gene, 40105 | |
Gm22341 | 3 | 128 | - | snoRNA gene | predicted gene, 22341 | |
Gm24216 | 3 | 116 | - | snoRNA gene | predicted gene, 24216 | |
Wars2 | 3 | 80612 | + | protein coding gene | tryptophanyl tRNA synthetase 2 (mitochondrial) | |
Cpgi13608 | 3 | 883 | CpG island | CpG island 13608 | ||
Tssr30855 | 3 | 9 | + | TSS region | transcription start site region 30855 | |
Tssr30856 | 3 | 22 | + | TSS region | transcription start site region 30856 | |
Gm43024 | 3 | 4351 | + | sense intronic lncRNA gene | predicted gene 43024 | |
Gm18982 | 3 | 528 | - | pseudogene | predicted gene, 18982 | |
Mir6481 | 3 | 109 | - | miRNA gene | microRNA 6481 | |
Gm42717 | 3 | 3462 | + | sense intronic lncRNA gene | predicted gene 42717 | |
Cpgi13609 | 3 | 335 | CpG island | CpG island 13609 | ||
Gm38468 | 3 | 2215 | + | lncRNA gene | predicted gene, 38468 | |
D3Mit10 | 3 | 141 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 10 | ||
Iba2 | 3 | 141 | QTL | induction of brown adipocytes 2 | ||
Tssr30857 | 3 | 9 | + | TSS region | transcription start site region 30857 | |
Tssr30858 | 3 | 24 | + | TSS region | transcription start site region 30858 | |
Tbx15 | 3 | 113878 | + | protein coding gene | T-box 15 | |
Gm46817 | 3 | 1240 | - | lncRNA gene | predicted gene, 46817 | |
Cpgi13610 | 3 | 805 | CpG island | CpG island 13610 | ||
Cpgi13611 | 3 | 1063 | CpG island | CpG island 13611 | ||
Tssr30859 | 3 | 12 | + | TSS region | transcription start site region 30859 | |
Tssr30860 | 3 | 37 | + | TSS region | transcription start site region 30860 | |
Tssr34737 | 3 | 11 | - | TSS region | transcription start site region 34737 | |
Tssr34738 | 3 | 18 | - | TSS region | transcription start site region 34738 | |
Tssr30861 | 3 | 53 | + | TSS region | transcription start site region 30861 | |
Gm43120 | 3 | 6587 | - | antisense lncRNA gene | predicted gene 43120 | |
Cpgi13612 | 3 | 277 | CpG island | CpG island 13612 | ||
Tssr30862 | 3 | 11 | + | TSS region | transcription start site region 30862 | |
Tssr30863 | 3 | 11 | + | TSS region | transcription start site region 30863 | |
Tssr982 | 3 | 9 | + | TSS region | transcription start site region 982 | |
Tssr30864 | 3 | 15 | + | TSS region | transcription start site region 30864 | |
Tssr34739 | 3 | 18 | - | TSS region | transcription start site region 34739 | |
Tssr30865 | 3 | 15 | + | TSS region | transcription start site region 30865 | |
Gm12449 | 3 | 233 | - | pseudogene | predicted gene 12449 | |
M6pr-ps | 3 | 829 | + | pseudogene | mannose-6-phosphate receptor, pseudogene | |
Gm12448 | 3 | 654 | - | pseudogene | predicted gene 12448 | |
Gm22505 | 3 | 107 | - | snRNA gene | predicted gene, 22505 | |
D3Mit283 | 3 | 146 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 283 | ||
D3Jpk1 | 3 | 263 | DNA segment | DNA segment, Chr 3, Japan, Kominami 1 | ||
Tssr30866 | 3 | 36 | + | TSS region | transcription start site region 30866 | |
Tssr30867 | 3 | 14 | + | TSS region | transcription start site region 30867 | |
Tssr30868 | 3 | 40 | + | TSS region | transcription start site region 30868 | |
Tssr30869 | 3 | 3 | + | TSS region | transcription start site region 30869 | |
Tssr30870 | 3 | 38 | + | TSS region | transcription start site region 30870 | |
Tssr30871 | 3 | 22 | + | TSS region | transcription start site region 30871 | |
Tssr34740 | 3 | 10 | - | TSS region | transcription start site region 34740 | |
Tssr30872 | 3 | 1 | + | TSS region | transcription start site region 30872 | |
Rpl36-ps7 | 3 | 314 | + | pseudogene | ribosomal protein L36, pseudogene 7 | |
Tra2b-ps | 3 | 167 | - | pseudogene | transformer 2 beta, pseudogene | |
Spag17os | 3 | 6211 | - | antisense lncRNA gene | sperm associated antigen 17, opposite strand | |
Wdr3 | 3 | 24223 | - | protein coding gene | WD repeat domain 3 | |
Tssr34741 | 3 | 12 | - | TSS region | transcription start site region 34741 | |
Spag17 | 3 | -257905 | + | protein coding gene | sperm associated antigen 17 | |
Cpgi13613 | 3 | 1005 | CpG island | CpG island 13613 | ||
Tssr34742 | 3 | 50 | - | TSS region | transcription start site region 34742 | |
Tssr30873 | 3 | 82 | + | TSS region | transcription start site region 30873 | |
Gdap2 | 3 | 44526 | + | protein coding gene | ganglioside-induced differentiation-associated-protein 2 | |
Tssr30874 | 3 | 11 | + | TSS region | transcription start site region 30874 | |
Gm25802 | 3 | 76 | + | snoRNA gene | predicted gene, 25802 | |
Tssr34743 | 3 | 5 | - | TSS region | transcription start site region 34743 | |
Gm12464 | 3 | 1015 | + | pseudogene | predicted gene 12464 | |
Gm32471 | 3 | 4334 | + | lncRNA gene | predicted gene, 32471 | |
4930406D18Rik | 3 | 11349 | + | lncRNA gene | RIKEN cDNA 4930406D18 gene | |
Tssr30875 | 3 | 24 | + | TSS region | transcription start site region 30875 | |
Tssr30876 | 3 | 4 | + | TSS region | transcription start site region 30876 | |
Gm43121 | 3 | 1304 | + | lincRNA gene | predicted gene 43121 | |
Tssr30877 | 3 | 41 | + | TSS region | transcription start site region 30877 | |
Gm38530 | 3 | 7766 | - | lncRNA gene | predicted gene, 38530 | |
D3Mit12 | 3 | 148 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 12 | ||
Ap6q | 3 | 46874371 | QTL | alcohol preference 6 QTL | ||
Nctm1 | 3 | -2674422 | QTL | Nakano cataract modifier 1 | ||
Tent5c | 3 | 21135 | - | protein coding gene | terminal nucleotidyltransferase 5C | |
Tssr34744 | 3 | 19 | - | TSS region | transcription start site region 34744 | |
Tssr34745 | 3 | 5 | - | TSS region | transcription start site region 34745 | |
Tssr34746 | 3 | 2 | - | TSS region | transcription start site region 34746 | |
Tssr34747 | 3 | 34 | - | TSS region | transcription start site region 34747 | |
Cpgi13614 | 3 | 1812 | CpG island | CpG island 13614 | ||
Tssr34748 | 3 | 52 | - | TSS region | transcription start site region 34748 | |
Tssr34749 | 3 | 14 | - | TSS region | transcription start site region 34749 | |
Tssr34750 | 3 | 22 | - | TSS region | transcription start site region 34750 | |
Tssr34751 | 3 | 25 | - | TSS region | transcription start site region 34751 | |
Tssr983 | 3 | 9 | - | TSS region | transcription start site region 983 | |
Tssr984 | 3 | 5 | - | TSS region | transcription start site region 984 | |
Tssr30878 | 3 | 33 | + | TSS region | transcription start site region 30878 | |
Tssr30879 | 3 | 52 | + | TSS region | transcription start site region 30879 | |
Gm12474 | 3 | 34256 | + | lincRNA gene | predicted gene 12474 | |
Gm40106 | 3 | 45990 | - | lncRNA gene | predicted gene, 40106 | |
Gm42868 | 3 | 2696 | + | sense intronic lncRNA gene | predicted gene 42868 | |
Ltpr3g | 3 | 146 | QTL | Leishmania tropica response 3g | ||
Ltpr3f | 3 | 146 | QTL | Leishmania tropica response 3f | ||
Ltpr3e | 3 | 146 | QTL | Leishmania tropica response 3e | ||
Ltpr3d | 3 | 146 | QTL | Leishmania tropica response 3d | ||
Ltpr3c | 3 | 146 | QTL | Leishmania tropica response 3c | ||
Ltpr3b | 3 | 146 | QTL | Leishmania tropica response 3b | ||
Lmr11a | 3 | 146 | QTL | leishmaniasis resistance 11a | ||
D3Mit11 | 3 | 146 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 11 | ||
tnyw | 3 | 21152164 | heritable phenotypic marker | tiny wasting | ||
Ltpr3 | 3 | -43760140 | QTL | Leishmania tropica response 3 | ||
Rapop3 | 3 | -9952911 | QTL | radiation-induced apoptosis 3 | ||
Man1a2 | 3 | 123270 | - | protein coding gene | mannosidase, alpha, class 1A, member 2 | |
Gm43466 | 3 | 5213 | - | sense intronic lncRNA gene | predicted gene 43466 | |
Gm42869 | 3 | 2120 | - | sense intronic lncRNA gene | predicted gene 42869 | |
Gm43462 | 3 | 3647 | - | sense intronic lncRNA gene | predicted gene 43462 | |
Tssr34752 | 3 | 12 | - | TSS region | transcription start site region 34752 | |
Gm43463 | 3 | 1802 | - | sense intronic lncRNA gene | predicted gene 43463 | |
Gm12485 | 3 | 290 | + | pseudogene | predicted gene 12485 | |
Tssr34753 | 3 | 36 | - | TSS region | transcription start site region 34753 | |
Cpgi13615 | 3 | 1727 | CpG island | CpG island 13615 | ||
Tssr34754 | 3 | 13 | - | TSS region | transcription start site region 34754 | |
Tssr34755 | 3 | 4 | - | TSS region | transcription start site region 34755 | |
Tssr34756 | 3 | 63 | - | TSS region | transcription start site region 34756 | |
Tssr30880 | 3 | 71 | + | TSS region | transcription start site region 30880 | |
Tssr34757 | 3 | 18 | - | TSS region | transcription start site region 34757 | |
Tssr34758 | 3 | 94 | - | TSS region | transcription start site region 34758 | |
Tssr30881 | 3 | 29 | + | TSS region | transcription start site region 30881 | |
Gm43464 | 3 | 7378 | + | lincRNA gene | predicted gene 43464 | |
Gm23465 | 3 | 261 | - | unclassified non-coding RNA gene | predicted gene, 23465 | |
Cia5b | 3 | 3089595 | QTL | collagen induced arthritis QTL 5b | ||
D3Mit75 | 3 | 106 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 75 | ||
Char4 | 3 | -31029798 | QTL | P. chabaudi malaria resistance QTL 4 | ||
Tssr30882 | 3 | 32 | + | TSS region | transcription start site region 30882 | |
Gm40107 | 3 | 6214 | - | lncRNA gene | predicted gene, 40107 | |
Gm32720 | 3 | 6626 | - | lncRNA gene | predicted gene, 32720 | |
Tssr30883 | 3 | 15 | + | TSS region | transcription start site region 30883 | |
Vtcn1 | 3 | 71463 | + | protein coding gene | V-set domain containing T cell activation inhibitor 1 | |
Gm40108 | 3 | 6283 | + | lncRNA gene | predicted gene, 40108 | |
Tssr30884 | 3 | 8 | + | TSS region | transcription start site region 30884 | |
Tssr30885 | 3 | 10 | + | TSS region | transcription start site region 30885 | |
Cpgi13616 | 3 | 808 | CpG island | CpG island 13616 | ||
Tssr30886 | 3 | 37 | + | TSS region | transcription start site region 30886 | |
Tssr30887 | 3 | 17 | + | TSS region | transcription start site region 30887 | |
Trim45 | 3 | 14432 | + | protein coding gene | tripartite motif-containing 45 | |
Tssr30888 | 3 | 18 | + | TSS region | transcription start site region 30888 | |
Ttf2 | 3 | 30803 | - | protein coding gene | transcription termination factor, RNA polymerase II | |
Gm12488 | 3 | 498 | + | pseudogene | predicted gene 12488 | |
Cpgi13617 | 3 | 601 | CpG island | CpG island 13617 | ||
Tssr34759 | 3 | 32 | - | TSS region | transcription start site region 34759 | |
Tssr34760 | 3 | 5 | - | TSS region | transcription start site region 34760 | |
Cfsw1 | 3 | 132 | QTL | cystic fibrosis survival to weaning 1 | ||
D3Mit189 | 3 | 132 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 189 | ||
Cd101 | 3 | 35966 | - | protein coding gene | CD101 antigen | |
Tssr34761 | 3 | 35 | - | TSS region | transcription start site region 34761 | |
Tssr34762 | 3 | 19 | - | TSS region | transcription start site region 34762 | |
Tssr30889 | 3 | 34 | + | TSS region | transcription start site region 30889 |