Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:98677826-99152521

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68 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm12400 3 98680832 to 98688182 7350 - pseudogene predicted gene 12400
Tssr30851 3 98684923 to 98684932 9 + TSS region transcription start site region 30851
Hsd3b2 3 98711107 to 98724595 13488 - protein coding gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
Tssr34702 3 98723893 to 98723925 32 - TSS region transcription start site region 34702
Tssr34703 3 98724554 to 98724577 23 - TSS region transcription start site region 34703
Hsd3b3 3 98741523 to 98763127 21604 - protein coding gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 3
Tssr34704 3 98741854 to 98741866 12 - TSS region transcription start site region 34704
Tssr34705 3 98760552 to 98760573 21 - TSS region transcription start site region 34705
Hsd3b6 3 98805504 to 98814443 8939 - protein coding gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6
Tssr34706 3 98814434 to 98814449 15 - TSS region transcription start site region 34706
Gm12427 3 98818082 to 98820019 1937 - pseudogene predicted gene 12427
Cpgi13606 3 98820912 to 98821124 212 CpG island CpG island 13606
Gm12428 3 98821038 to 98821764 726 + pseudogene predicted gene 12428
Gm12431 3 98842871 to 98843038 167 - pseudogene predicted gene 12431
Gm12432 3 98846339 to 98846524 185 - pseudogene predicted gene 12432
Gm12433 3 98846506 to 98846760 254 + pseudogene predicted gene 12433
Hsd3b1 3 98852194 to 98859794 7600 - protein coding gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1
Tssr30852 3 98852555 to 98852566 11 + TSS region transcription start site region 30852
Tssr30853 3 98852710 to 98852731 21 + TSS region transcription start site region 30853
Tssr34707 3 98852943 to 98852962 19 - TSS region transcription start site region 34707
Tssr34708 3 98853130 to 98853143 13 - TSS region transcription start site region 34708
Tssr34709 3 98853276 to 98853290 14 - TSS region transcription start site region 34709
Tssr34710 3 98853330 to 98853347 17 - TSS region transcription start site region 34710
Tssr34711 3 98856066 to 98856081 15 - TSS region transcription start site region 34711
Tssr979 3 98857914 to 98857915 1 - TSS region transcription start site region 979
Tssr34712 3 98857920 to 98857931 11 - TSS region transcription start site region 34712
Tssr34713 3 98857967 to 98857985 18 - TSS region transcription start site region 34713
Tssr34714 3 98858006 to 98858017 11 - TSS region transcription start site region 34714
Tssr34715 3 98858100 to 98858120 20 - TSS region transcription start site region 34715
Tssr34716 3 98858123 to 98858139 16 - TSS region transcription start site region 34716
Tssr34717 3 98858183 to 98858231 48 - TSS region transcription start site region 34717
Tssr34718 3 98858243 to 98858265 22 - TSS region transcription start site region 34718
Tssr34719 3 98858289 to 98858296 7 - TSS region transcription start site region 34719
Tssr980 3 98858301 to 98858305 4 - TSS region transcription start site region 980
Tssr34720 3 98858310 to 98858312 2 - TSS region transcription start site region 34720
Tssr981 3 98858327 to 98858328 1 - TSS region transcription start site region 981
Tssr34721 3 98859711 to 98859721 10 - TSS region transcription start site region 34721
Tssr34722 3 98859729 to 98859749 20 - TSS region transcription start site region 34722
Tssr34723 3 98859753 to 98859769 16 - TSS region transcription start site region 34723
Tssr34724 3 98859774 to 98859800 26 - TSS region transcription start site region 34724
Hao2 3 98874521 to 98893239 18718 - protein coding gene hydroxyacid oxidase 2
Tssr34725 3 98880673 to 98880693 20 - TSS region transcription start site region 34725
Tssr30854 3 98881249 to 98881253 4 + TSS region transcription start site region 30854
Tssr34726 3 98882018 to 98882036 18 - TSS region transcription start site region 34726
Tssr34727 3 98882038 to 98882071 33 - TSS region transcription start site region 34727
Tssr34728 3 98882075 to 98882090 15 - TSS region transcription start site region 34728
Tssr34729 3 98882159 to 98882170 11 - TSS region transcription start site region 34729
Tssr34730 3 98882222 to 98882227 5 - TSS region transcription start site region 34730
Tssr34731 3 98882233 to 98882239 6 - TSS region transcription start site region 34731
Tssr34732 3 98882240 to 98882268 28 - TSS region transcription start site region 34732
Tssr34733 3 98882283 to 98882294 11 - TSS region transcription start site region 34733
Tssr34734 3 98882297 to 98882307 10 - TSS region transcription start site region 34734
Tssr34735 3 98882312 to 98882323 11 - TSS region transcription start site region 34735
Tssr34736 3 98893209 to 98893245 36 - TSS region transcription start site region 34736
Gm31880 3 98897826 to 98932525 34699 - lncRNA gene predicted gene, 31880
5730437C11Rik 3 98937649 to 98941256 3607 - lincRNA gene RIKEN cDNA 5730437C11 gene
Cpgi13607 3 98941173 to 98941525 352 CpG island CpG island 13607
D3Mit190 3 99001749 to 99001884 135 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 190
Gm12440 3 99049822 to 99053742 3920 + lincRNA gene predicted gene 12440
Gm12441 3 99100667 to 99101154 487 - pseudogene predicted gene 12441
Gm40105 3 99110959 to 99115695 4736 + lncRNA gene predicted gene, 40105
Gm22341 3 99113155 to 99113283 128 - snoRNA gene predicted gene, 22341
Gm24216 3 99124186 to 99124302 116 - snoRNA gene predicted gene, 24216
Wars2 3 99140618 to 99221230 80612 + protein coding gene tryptophanyl tRNA synthetase 2 (mitochondrial)
Cpgi13608 3 99140878 to 99141761 883 CpG island CpG island 13608
Tssr30855 3 99141063 to 99141072 9 + TSS region transcription start site region 30855
Tssr30856 3 99141081 to 99141103 22 + TSS region transcription start site region 30856
Gm43024 3 99144603 to 99148954 4351 + sense intronic lncRNA gene predicted gene 43024