Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:97963538-98200367

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Gm5544 3 97930173 to 97967018 36845 + lincRNA gene predicted gene 5544
Tssr30808 3 97978922 to 97978986 64 + TSS region transcription start site region 30808
Tssr30809 3 97992465 to 97992469 4 + TSS region transcription start site region 30809
Tssr34691 3 97994938 to 97994963 25 - TSS region transcription start site region 34691
Tssr975 3 97998416 to 97998425 9 - TSS region transcription start site region 975
D3Mit298.2 3 98010743 to 98010858 115 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 298.2
Cpgi13600 3 98013007 to 98014283 1276 CpG island CpG island 13600
Tssr30810 3 98013483 to 98013502 19 + TSS region transcription start site region 30810
Tssr30811 3 98013503 to 98013547 44 + TSS region transcription start site region 30811
Notch2 3 98013538 to 98150367 136829 + protein coding gene notch 2
Tssr30812 3 98013550 to 98013574 24 + TSS region transcription start site region 30812
Tssr30813 3 98013592 to 98013609 17 + TSS region transcription start site region 30813
Tssr30814 3 98013620 to 98013631 11 + TSS region transcription start site region 30814
Gm40103 3 98022306 to 98026882 4576 - lncRNA gene predicted gene, 40103
Cpgi13601 3 98024433 to 98024593 160 CpG island CpG island 13601
Gm42819 3 98030687 to 98035807 5120 + unclassified gene predicted gene 42819
Tssr34692 3 98032354 to 98032359 5 - TSS region transcription start site region 34692
Tssr30815 3 98037439 to 98037443 4 + TSS region transcription start site region 30815
Tssr30816 3 98045087 to 98045090 3 + TSS region transcription start site region 30816
Tssr34693 3 98069339 to 98069351 12 - TSS region transcription start site region 34693
Tssr30817 3 98109199 to 98109218 19 + TSS region transcription start site region 30817
Tssr30818 3 98114358 to 98114377 19 + TSS region transcription start site region 30818
Gm42820 3 98121588 to 98124650 3062 + unclassified gene predicted gene 42820
Tssr30819 3 98127009 to 98127031 22 + TSS region transcription start site region 30819
Tssr30820 3 98127092 to 98127117 25 + TSS region transcription start site region 30820
Tssr30821 3 98146450 to 98146480 30 + TSS region transcription start site region 30821
Tssr30822 3 98147167 to 98147178 11 + TSS region transcription start site region 30822
Tssr30823 3 98149082 to 98149109 27 + TSS region transcription start site region 30823
Tssr30824 3 98149803 to 98149805 2 + TSS region transcription start site region 30824
Tssr30825 3 98149855 to 98149876 21 + TSS region transcription start site region 30825
Tssr30826 3 98160623 to 98160639 16 + TSS region transcription start site region 30826
Adam30 3 98160634 to 98164169 3535 + protein coding gene a disintegrin and metallopeptidase domain 30
Tssr30827 3 98160640 to 98160651 11 + TSS region transcription start site region 30827
D3Mit213 3 98177336 to 98177481 145 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 213
Pcfm3 3 98177336 to 98177481 145 QTL periosteal circumference and femur length 3
Gm9771 3 98189966 to 98191102 1136 - pseudogene predicted gene 9771