Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Chd1l | 3 | 49461 | - | protein coding gene | chromodomain helicase DNA binding protein 1-like | |
Cpgi13591 | 3 | 776 | CpG island | CpG island 13591 | ||
Gm43075 | 3 | 3904 | + | unclassified gene | predicted gene 43075 | |
Tssr34660 | 3 | 66 | - | TSS region | transcription start site region 34660 | |
Fmo5 | 3 | 26478 | + | protein coding gene | flavin containing monooxygenase 5 | |
Tssr30791 | 3 | 20 | + | TSS region | transcription start site region 30791 | |
Tssr30792 | 3 | 11 | + | TSS region | transcription start site region 30792 | |
Tssr30793 | 3 | 20 | + | TSS region | transcription start site region 30793 | |
Tssr30794 | 3 | 14 | + | TSS region | transcription start site region 30794 | |
Tssr30795 | 3 | 12 | + | TSS region | transcription start site region 30795 | |
Tssr30796 | 3 | 8 | + | TSS region | transcription start site region 30796 | |
Tssr30797 | 3 | 12 | + | TSS region | transcription start site region 30797 | |
Tssr974 | 3 | 31 | + | TSS region | transcription start site region 974 | |
Tssr30798 | 3 | 74 | + | TSS region | transcription start site region 30798 | |
Cpgi13592 | 3 | 1127 | CpG island | CpG island 13592 | ||
Prkab2 | 3 | 15600 | + | protein coding gene | protein kinase, AMP-activated, beta 2 non-catalytic subunit | |
Tssr30799 | 3 | 48 | + | TSS region | transcription start site region 30799 | |
Tssr30800 | 3 | 9 | + | TSS region | transcription start site region 30800 | |
Tssr30801 | 3 | 60 | + | TSS region | transcription start site region 30801 | |
Tssr30802 | 3 | 12 | + | TSS region | transcription start site region 30802 | |
Gm17651 | 3 | 1663 | - | protein coding gene | predicted gene, 17651 | |
Gm31242 | 3 | 1725 | + | lncRNA gene | predicted gene, 31242 | |
Cpgi13593 | 3 | 791 | CpG island | CpG island 13593 | ||
n-TQctg2 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA glutamine 2 (anticodon CTG) | |
Pde4dip | 3 | 198879 | - | protein coding gene | phosphodiesterase 4D interacting protein (myomegalin) | |
Mir7225 | 3 | 53 | - | miRNA gene | microRNA 7225 | |
Tssr30803 | 3 | 10 | + | TSS region | transcription start site region 30803 | |
Tssr34661 | 3 | 14 | - | TSS region | transcription start site region 34661 | |
Tssr34662 | 3 | 30 | - | TSS region | transcription start site region 34662 | |
Tssr34663 | 3 | 16 | - | TSS region | transcription start site region 34663 | |
Tssr34664 | 3 | 12 | - | TSS region | transcription start site region 34664 | |
Tssr34665 | 3 | 7 | - | TSS region | transcription start site region 34665 | |
Tssr34666 | 3 | 37 | - | TSS region | transcription start site region 34666 | |
Tssr34667 | 3 | 39 | - | TSS region | transcription start site region 34667 | |
Tssr34668 | 3 | 4 | - | TSS region | transcription start site region 34668 | |
Gm31305 | 3 | 5827 | + | antisense lncRNA gene | predicted gene, 31305 | |
Tssr34669 | 3 | 41 | - | TSS region | transcription start site region 34669 | |
Gm46816 | 3 | 2042 | + | lncRNA gene | predicted gene, 46816 | |
Cpgi13594 | 3 | 251 | CpG island | CpG island 13594 | ||
Tssr34670 | 3 | 4 | - | TSS region | transcription start site region 34670 | |
A630078F23Rik | 3 | 1249 | unclassified gene | RIKEN cDNA A630078F23 gene | ||
Tssr34671 | 3 | 5 | - | TSS region | transcription start site region 34671 | |
Cpgi13595 | 3 | 1540 | CpG island | CpG island 13595 | ||
Tssr34672 | 3 | 95 | - | TSS region | transcription start site region 34672 | |
Tssr34673 | 3 | 108 | - | TSS region | transcription start site region 34673 | |
Tssr34674 | 3 | 4 | - | TSS region | transcription start site region 34674 | |
Gm18823 | 3 | 776 | - | pseudogene | predicted gene, 18823 | |
D3Mit41 | 3 | 208 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 41 | ||
D3Mit233 | 3 | 288 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 233 | ||
Cpgi13596 | 3 | 447 | CpG island | CpG island 13596 | ||
Tssr34675 | 3 | 14 | - | TSS region | transcription start site region 34675 | |
Tssr34676 | 3 | 36 | - | TSS region | transcription start site region 34676 | |
Cpgi13597 | 3 | 787 | CpG island | CpG island 13597 | ||
Tssr34677 | 3 | 11 | - | TSS region | transcription start site region 34677 | |
Tssr34678 | 3 | 11 | - | TSS region | transcription start site region 34678 | |
Tssr34679 | 3 | 15 | - | TSS region | transcription start site region 34679 | |
Tssr34680 | 3 | 13 | - | TSS region | transcription start site region 34680 | |
Tssr34681 | 3 | 5 | - | TSS region | transcription start site region 34681 | |
Tssr34682 | 3 | 19 | - | TSS region | transcription start site region 34682 | |
Tssr34683 | 3 | 11 | - | TSS region | transcription start site region 34683 | |
Tssr34684 | 3 | 4 | - | TSS region | transcription start site region 34684 | |
Cpgi13598 | 3 | 735 | CpG island | CpG island 13598 | ||
Tssr34685 | 3 | 19 | - | TSS region | transcription start site region 34685 | |
Tssr34686 | 3 | 133 | - | TSS region | transcription start site region 34686 | |
Tssr34687 | 3 | 18 | - | TSS region | transcription start site region 34687 | |
Tssr34688 | 3 | 18 | - | TSS region | transcription start site region 34688 | |
Gm15999 | 3 | 8858 | - | lincRNA gene | predicted gene 15999 | |
Cpgi13599 | 3 | 475 | CpG island | CpG island 13599 | ||
Tssr30804 | 3 | 51 | + | TSS region | transcription start site region 30804 | |
Sec22b | 3 | 21091 | + | protein coding gene | SEC22 homolog B, vesicle trafficking protein | |
Tssr30805 | 3 | 54 | + | TSS region | transcription start site region 30805 | |
Gm5544 | 3 | 36845 | + | lincRNA gene | predicted gene 5544 | |
Tssr30806 | 3 | 9 | + | TSS region | transcription start site region 30806 | |
Tssr30807 | 3 | 28 | + | TSS region | transcription start site region 30807 | |
Tssr34689 | 3 | 60 | - | TSS region | transcription start site region 34689 | |
Tssr34690 | 3 | 26 | - | TSS region | transcription start site region 34690 | |
Tssr30808 | 3 | 64 | + | TSS region | transcription start site region 30808 | |
Tssr30809 | 3 | 4 | + | TSS region | transcription start site region 30809 | |
Tssr34691 | 3 | 25 | - | TSS region | transcription start site region 34691 | |
Tssr975 | 3 | 9 | - | TSS region | transcription start site region 975 | |
D3Mit298.2 | 3 | 115 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 298.2 | ||
Cpgi13600 | 3 | 1276 | CpG island | CpG island 13600 | ||
Tssr30810 | 3 | 19 | + | TSS region | transcription start site region 30810 | |
Tssr30811 | 3 | 44 | + | TSS region | transcription start site region 30811 | |
Notch2 | 3 | 136829 | + | protein coding gene | notch 2 | |
Tssr30812 | 3 | 24 | + | TSS region | transcription start site region 30812 | |
Tssr30813 | 3 | 17 | + | TSS region | transcription start site region 30813 | |
Tssr30814 | 3 | 11 | + | TSS region | transcription start site region 30814 | |
Gm40103 | 3 | 4576 | - | lncRNA gene | predicted gene, 40103 | |
Cpgi13601 | 3 | 160 | CpG island | CpG island 13601 | ||
Gm42819 | 3 | 5120 | + | unclassified gene | predicted gene 42819 | |
Tssr34692 | 3 | 5 | - | TSS region | transcription start site region 34692 | |
Tssr30815 | 3 | 4 | + | TSS region | transcription start site region 30815 | |
Tssr30816 | 3 | 3 | + | TSS region | transcription start site region 30816 | |
Tssr34693 | 3 | 12 | - | TSS region | transcription start site region 34693 | |
Tssr30817 | 3 | 19 | + | TSS region | transcription start site region 30817 | |
Tssr30818 | 3 | 19 | + | TSS region | transcription start site region 30818 | |
Gm42820 | 3 | 3062 | + | unclassified gene | predicted gene 42820 | |
Tssr30819 | 3 | 22 | + | TSS region | transcription start site region 30819 | |
Tssr30820 | 3 | 25 | + | TSS region | transcription start site region 30820 | |
Tssr30821 | 3 | 30 | + | TSS region | transcription start site region 30821 | |
Tssr30822 | 3 | 11 | + | TSS region | transcription start site region 30822 | |
Tssr30823 | 3 | 27 | + | TSS region | transcription start site region 30823 | |
Tssr30824 | 3 | 2 | + | TSS region | transcription start site region 30824 | |
Tssr30825 | 3 | 21 | + | TSS region | transcription start site region 30825 | |
Tssr30826 | 3 | 16 | + | TSS region | transcription start site region 30826 | |
Adam30 | 3 | 3535 | + | protein coding gene | a disintegrin and metallopeptidase domain 30 | |
Tssr30827 | 3 | 11 | + | TSS region | transcription start site region 30827 | |
D3Mit213 | 3 | 145 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 213 | ||
Pcfm3 | 3 | 145 | QTL | periosteal circumference and femur length 3 | ||
Gm9771 | 3 | 1136 | - | pseudogene | predicted gene 9771 | |
Gm40104 | 3 | 4413 | + | lncRNA gene | predicted gene, 40104 | |
Tssr976 | 3 | 3 | + | TSS region | transcription start site region 976 | |
Tssr30828 | 3 | 16 | + | TSS region | transcription start site region 30828 | |
Reg4 | 3 | 14592 | + | protein coding gene | regenerating islet-derived family, member 4 | |
Cpgi13602 | 3 | 169 | CpG island | CpG island 13602 | ||
Gm42821 | 3 | 488 | + | pseudogene | predicted gene 42821 | |
Tssr30829 | 3 | 22 | + | TSS region | transcription start site region 30829 | |
Tssr30830 | 3 | 6 | + | TSS region | transcription start site region 30830 | |
Tssr30831 | 3 | 17 | + | TSS region | transcription start site region 30831 | |
Hmgcs2 | 3 | 30303 | + | protein coding gene | 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2 | |
Tssr30832 | 3 | 17 | + | TSS region | transcription start site region 30832 | |
Gm43189 | 3 | 3068 | + | sense intronic lncRNA gene | predicted gene 43189 | |
Tssr30833 | 3 | 1 | + | TSS region | transcription start site region 30833 | |
Tssr30834 | 3 | 16 | + | TSS region | transcription start site region 30834 | |
Tssr30835 | 3 | 11 | + | TSS region | transcription start site region 30835 | |
Tssr30836 | 3 | 13 | + | TSS region | transcription start site region 30836 | |
Tssr30837 | 3 | 15 | + | TSS region | transcription start site region 30837 | |
Tssr30838 | 3 | 23 | + | TSS region | transcription start site region 30838 | |
Tssr30839 | 3 | 7 | + | TSS region | transcription start site region 30839 | |
Tssr30840 | 3 | 20 | + | TSS region | transcription start site region 30840 | |
Tssr30841 | 3 | 28 | + | TSS region | transcription start site region 30841 | |
Tssr30842 | 3 | 19 | + | TSS region | transcription start site region 30842 | |
Tssr30843 | 3 | 11 | + | TSS region | transcription start site region 30843 | |
Tssr30844 | 3 | 14 | + | TSS region | transcription start site region 30844 | |
Tssr30845 | 3 | 22 | + | TSS region | transcription start site region 30845 | |
Phgdh | 3 | 26798 | - | protein coding gene | 3-phosphoglycerate dehydrogenase | |
Tssr34694 | 3 | 4 | - | TSS region | transcription start site region 34694 | |
Tssr34695 | 3 | 3 | - | TSS region | transcription start site region 34695 | |
Tssr34696 | 3 | 4 | - | TSS region | transcription start site region 34696 | |
Cpgi13603 | 3 | 896 | CpG island | CpG island 13603 | ||
Tssr34697 | 3 | 24 | - | TSS region | transcription start site region 34697 | |
Gm31420 | 3 | 3455 | + | lncRNA gene | predicted gene, 31420 | |
Tssr977 | 3 | 5 | - | TSS region | transcription start site region 977 | |
Tssr34698 | 3 | 8 | - | TSS region | transcription start site region 34698 | |
Zfp697 | 3 | 50612 | + | protein coding gene | zinc finger protein 697 | |
Cpgi13604 | 3 | 1067 | CpG island | CpG island 13604 | ||
Tssr34699 | 3 | 42 | - | TSS region | transcription start site region 34699 | |
Tssr30846 | 3 | 82 | + | TSS region | transcription start site region 30846 | |
Nctm1 | 3 | -2674422 | QTL | Nakano cataract modifier 1 |