Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96775294-97035341

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Rnf115 3 96727585 to 96791155 63570 + protein coding gene ring finger protein 115
Gm42782 3 96784325 to 96784846 521 + unclassified gene predicted gene 42782
Tssr30769 3 96795921 to 96795934 13 + TSS region transcription start site region 30769
Cd160 3 96798763 to 96829351 30588 - protein coding gene CD160 antigen
Tssr34643 3 96814518 to 96814532 14 - TSS region transcription start site region 34643
Tssr973 3 96824084 to 96824089 5 + TSS region transcription start site region 973
Tssr30770 3 96824104 to 96824123 19 + TSS region transcription start site region 30770
Pdzk1 3 96829384 to 96870926 41542 + protein coding gene PDZ domain containing 1
Tssr30771 3 96829427 to 96829435 8 + TSS region transcription start site region 30771
Tssr30772 3 96829459 to 96829474 15 + TSS region transcription start site region 30772
Tssr30773 3 96829493 to 96829501 8 + TSS region transcription start site region 30773
4930442L01Rik 3 96829826 to 96832070 2244 - antisense lncRNA gene RIKEN cDNA 4930442L01 gene
Tssr30774 3 96830069 to 96830115 46 + TSS region transcription start site region 30774
Tssr30775 3 96830123 to 96830139 16 + TSS region transcription start site region 30775
Tssr34644 3 96830970 to 96830975 5 - TSS region transcription start site region 34644
Tssr34645 3 96832049 to 96832081 32 - TSS region transcription start site region 34645
Tssr34646 3 96832090 to 96832095 5 - TSS region transcription start site region 34646
Tssr30776 3 96832142 to 96832181 39 + TSS region transcription start site region 30776
Tssr30777 3 96832182 to 96832191 9 + TSS region transcription start site region 30777
Tssr30778 3 96833218 to 96833257 39 + TSS region transcription start site region 30778
Tssr30779 3 96833265 to 96833276 11 + TSS region transcription start site region 30779
Gpr89 3 96868298 to 96905343 37045 - protein coding gene G protein-coupled receptor 89
Cpgi13582 3 96904685 to 96905446 761 CpG island CpG island 13582
Tssr34647 3 96905247 to 96905258 11 - TSS region transcription start site region 34647
Tssr34648 3 96905273 to 96905292 19 - TSS region transcription start site region 34648
Tssr34649 3 96905294 to 96905341 47 - TSS region transcription start site region 34649
Gja8 3 96913566 to 96926020 12454 - protein coding gene gap junction protein, alpha 8
Cpgi13583 3 96919764 to 96920294 530 CpG island CpG island 13583
Tssr34650 3 96925919 to 96925941 22 - TSS region transcription start site region 34650
Tssr34651 3 96926056 to 96926067 11 - TSS region transcription start site region 34651
Tssr30780 3 96975392 to 96975399 7 + TSS region transcription start site region 30780
9230114J08Rik 3 96998722 to 97000771 2049 - antisense lncRNA gene RIKEN cDNA 9230114J08 gene
Tssr30781 3 97032394 to 97032408 14 + TSS region transcription start site region 30781
Gja5 3 97032402 to 97053634 21232 + protein coding gene gap junction protein, alpha 5
Tssr30782 3 97032423 to 97032432 9 + TSS region transcription start site region 30782
Tssr30783 3 97032437 to 97032448 11 + TSS region transcription start site region 30783