MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 3:96674251-96724267

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ankrd35	3	96670131 to 96691032	20901	+	protein coding gene	ankyrin repeat domain 35
Tssr30752	3	96676242 to 96676255	13	+	TSS region	transcription start site region 30752
Cpgi13577	3	96684589 to 96685192	603		CpG island	CpG island 13577
C230057H02Rik	3	96693858 to 96697011	3153		unclassified gene	RIKEN cDNA C230057H02 gene
Cpgi13578	3	96696311 to 96697699	1388		CpG island	CpG island 13578
Tssr30753	3	96696379 to 96696396	17	+	TSS region	transcription start site region 30753
Pias3	3	96696384 to 96706070	9686	+	protein coding gene	protein inhibitor of activated STAT 3
Tssr30754	3	96696400 to 96696477	77	+	TSS region	transcription start site region 30754
Tssr30755	3	96697076 to 96697090	14	+	TSS region	transcription start site region 30755
Tssr30756	3	96697100 to 96697165	65	+	TSS region	transcription start site region 30756
Tssr30757	3	96699251 to 96699267	16	+	TSS region	transcription start site region 30757
Tssr30758	3	96699302 to 96699304	2	+	TSS region	transcription start site region 30758
Nudt17	3	96706067 to 96708562	2495	-	protein coding gene	nudix (nucleoside diphosphate linked moiety X)-type motif 17
Cpgi13579	3	96708178 to 96708646	468		CpG island	CpG island 13579
Tssr34639	3	96708524 to 96708553	29	-	TSS region	transcription start site region 34639
Polr3c	3	96711518 to 96727493	15975	-	protein coding gene	polymerase (RNA) III (DNA directed) polypeptide C
Cpgi13580	3	96719228 to 96719497	269		CpG island	CpG island 13580
Gm22581	3	96724265 to 96724400	135	-	snoRNA gene	predicted gene, 22581