Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
Lix1l | 3 | 24219 | + | protein coding gene | Lix1-like | |
6330549D23Rik | 3 | 23157 | - | pseudogene | RIKEN cDNA 6330549D23 gene | |
Cpgi13574 | 3 | 461 | CpG island | CpG island 13574 | ||
Tssr34637 | 3 | 40 | - | TSS region | transcription start site region 34637 | |
Tssr30742 | 3 | 26 | + | TSS region | transcription start site region 30742 | |
Tssr30743 | 3 | 36 | + | TSS region | transcription start site region 30743 | |
Rbm8a | 3 | 3858 | + | protein coding gene | RNA binding motif protein 8a | |
Tssr30744 | 3 | 32 | + | TSS region | transcription start site region 30744 | |
Cpgi13575 | 3 | 927 | CpG island | CpG island 13575 | ||
Pex11b | 3 | 9990 | + | protein coding gene | peroxisomal biogenesis factor 11 beta | |
Tssr30745 | 3 | 13 | + | TSS region | transcription start site region 30745 | |
Gm42957 | 3 | 17627 | + | protein coding gene | predicted gene 42957 | |
Tssr30746 | 3 | 69 | + | TSS region | transcription start site region 30746 | |
Tssr30747 | 3 | 20 | + | TSS region | transcription start site region 30747 | |
Tssr30748 | 3 | 28 | + | TSS region | transcription start site region 30748 | |
D3Mit101 | 3 | 107 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 101 | ||
Eae3 | 3 | 107 | QTL | experimental allergic encephalomyelitis susceptibility 3 | ||
Tssr30749 | 3 | 2 | + | TSS region | transcription start site region 30749 | |
Tssr30750 | 3 | 29 | + | TSS region | transcription start site region 30750 | |
Itga10 | 3 | 18935 | + | protein coding gene | integrin, alpha 10 | |
Rpl21-ps11 | 3 | 479 | - | pseudogene | ribosomal protein L21, pseudogene 11 | |
Tssr34638 | 3 | 10 | - | TSS region | transcription start site region 34638 | |
Cpgi13576 | 3 | 533 | CpG island | CpG island 13576 | ||
Ankrd35 | 3 | 20901 | + | protein coding gene | ankyrin repeat domain 35 | |
Tssr30751 | 3 | 48 | + | TSS region | transcription start site region 30751 | |
Tssr30752 | 3 | 13 | + | TSS region | transcription start site region 30752 | |
Cpgi13577 | 3 | 603 | CpG island | CpG island 13577 | ||
C230057H02Rik | 3 | 3153 | unclassified gene | RIKEN cDNA C230057H02 gene | ||
Cpgi13578 | 3 | 1388 | CpG island | CpG island 13578 | ||
Tssr30753 | 3 | 17 | + | TSS region | transcription start site region 30753 | |
Pias3 | 3 | 9686 | + | protein coding gene | protein inhibitor of activated STAT 3 | |
Tssr30754 | 3 | 77 | + | TSS region | transcription start site region 30754 | |
Tssr30755 | 3 | 14 | + | TSS region | transcription start site region 30755 | |
Tssr30756 | 3 | 65 | + | TSS region | transcription start site region 30756 | |
Tssr30757 | 3 | 16 | + | TSS region | transcription start site region 30757 | |
Tssr30758 | 3 | 2 | + | TSS region | transcription start site region 30758 | |
Nudt17 | 3 | 2495 | - | protein coding gene | nudix (nucleoside diphosphate linked moiety X)-type motif 17 | |
Cpgi13579 | 3 | 468 | CpG island | CpG island 13579 | ||
Tssr34639 | 3 | 29 | - | TSS region | transcription start site region 34639 | |
Polr3c | 3 | 15975 | - | protein coding gene | polymerase (RNA) III (DNA directed) polypeptide C | |
Cpgi13580 | 3 | 269 | CpG island | CpG island 13580 | ||
Gm22581 | 3 | 135 | - | snoRNA gene | predicted gene, 22581 | |
Gm42783 | 3 | 794 | - | unclassified gene | predicted gene 42783 | |
Cpgi13581 | 3 | 1091 | CpG island | CpG island 13581 | ||
Tssr34640 | 3 | 16 | - | TSS region | transcription start site region 34640 | |
Tssr34641 | 3 | 52 | - | TSS region | transcription start site region 34641 | |
Tssr30759 | 3 | 41 | + | TSS region | transcription start site region 30759 | |
Tssr34642 | 3 | 7 | - | TSS region | transcription start site region 34642 | |
Tssr30760 | 3 | 28 | + | TSS region | transcription start site region 30760 | |
Rnf115 | 3 | 63570 | + | protein coding gene | ring finger protein 115 | |
Tssr30761 | 3 | 7 | + | TSS region | transcription start site region 30761 | |
Tssr30762 | 3 | 67 | + | TSS region | transcription start site region 30762 | |
Tssr30763 | 3 | 27 | + | TSS region | transcription start site region 30763 | |
Tssr30764 | 3 | 4 | + | TSS region | transcription start site region 30764 | |
Tssr30765 | 3 | 8 | + | TSS region | transcription start site region 30765 | |
Tssr30766 | 3 | 46 | + | TSS region | transcription start site region 30766 | |
Tssr30767 | 3 | 11 | + | TSS region | transcription start site region 30767 | |
Tssr30768 | 3 | 37 | + | TSS region | transcription start site region 30768 | |
Gm42782 | 3 | 521 | + | unclassified gene | predicted gene 42782 | |
Tssr30769 | 3 | 13 | + | TSS region | transcription start site region 30769 | |
Cd160 | 3 | 30588 | - | protein coding gene | CD160 antigen | |
Tssr34643 | 3 | 14 | - | TSS region | transcription start site region 34643 | |
Tssr973 | 3 | 5 | + | TSS region | transcription start site region 973 | |
Tssr30770 | 3 | 19 | + | TSS region | transcription start site region 30770 | |
Pdzk1 | 3 | 41542 | + | protein coding gene | PDZ domain containing 1 | |
Tssr30771 | 3 | 8 | + | TSS region | transcription start site region 30771 | |
Tssr30772 | 3 | 15 | + | TSS region | transcription start site region 30772 | |
Tssr30773 | 3 | 8 | + | TSS region | transcription start site region 30773 | |
4930442L01Rik | 3 | 2244 | - | antisense lncRNA gene | RIKEN cDNA 4930442L01 gene | |
Tssr30774 | 3 | 46 | + | TSS region | transcription start site region 30774 | |
Tssr30775 | 3 | 16 | + | TSS region | transcription start site region 30775 | |
Tssr34644 | 3 | 5 | - | TSS region | transcription start site region 34644 | |
Tssr34645 | 3 | 32 | - | TSS region | transcription start site region 34645 | |
Tssr34646 | 3 | 5 | - | TSS region | transcription start site region 34646 | |
Tssr30776 | 3 | 39 | + | TSS region | transcription start site region 30776 | |
Tssr30777 | 3 | 9 | + | TSS region | transcription start site region 30777 | |
Tssr30778 | 3 | 39 | + | TSS region | transcription start site region 30778 | |
Tssr30779 | 3 | 11 | + | TSS region | transcription start site region 30779 | |
Gpr89 | 3 | 37045 | - | protein coding gene | G protein-coupled receptor 89 | |
Cpgi13582 | 3 | 761 | CpG island | CpG island 13582 | ||
Tssr34647 | 3 | 11 | - | TSS region | transcription start site region 34647 | |
Tssr34648 | 3 | 19 | - | TSS region | transcription start site region 34648 | |
Tssr34649 | 3 | 47 | - | TSS region | transcription start site region 34649 | |
Gja8 | 3 | 12454 | - | protein coding gene | gap junction protein, alpha 8 | |
Cpgi13583 | 3 | 530 | CpG island | CpG island 13583 | ||
Tssr34650 | 3 | 22 | - | TSS region | transcription start site region 34650 | |
Tssr34651 | 3 | 11 | - | TSS region | transcription start site region 34651 | |
Tssr30780 | 3 | 7 | + | TSS region | transcription start site region 30780 | |
9230114J08Rik | 3 | 2049 | - | antisense lncRNA gene | RIKEN cDNA 9230114J08 gene | |
Tssr30781 | 3 | 14 | + | TSS region | transcription start site region 30781 | |
Gja5 | 3 | 21232 | + | protein coding gene | gap junction protein, alpha 5 | |
Tssr30782 | 3 | 9 | + | TSS region | transcription start site region 30782 | |
Tssr30783 | 3 | 11 | + | TSS region | transcription start site region 30783 | |
4930573H18Rik | 3 | 46129 | - | antisense lncRNA gene | RIKEN cDNA 4930573H18 gene | |
Gm31120 | 3 | 1867 | + | lncRNA gene | predicted gene, 31120 | |
D3Mit100 | 3 | 140 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 100 | ||
Gm31183 | 3 | 1867 | + | lncRNA gene | predicted gene, 31183 | |
Gm43222 | 3 | 602 | - | pseudogene | predicted gene 43222 | |
Gm24435 | 3 | 109 | - | snRNA gene | predicted gene, 24435 | |
n-TEctc12 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA glutamic acid 12 (anticodon CTC) | |
Cpgi13584 | 3 | 714 | CpG island | CpG island 13584 | ||
Acp6 | 3 | 17825 | + | protein coding gene | acid phosphatase 6, lysophosphatidic | |
Tssr30784 | 3 | 53 | + | TSS region | transcription start site region 30784 | |
Tssr30785 | 3 | 22 | + | TSS region | transcription start site region 30785 | |
Tssr30786 | 3 | 18 | + | TSS region | transcription start site region 30786 | |
Tssr30787 | 3 | 27 | + | TSS region | transcription start site region 30787 | |
Tssr30788 | 3 | 17 | + | TSS region | transcription start site region 30788 | |
Tssr30789 | 3 | 22 | + | TSS region | transcription start site region 30789 | |
Tssr30790 | 3 | 13 | + | TSS region | transcription start site region 30790 | |
Bcl9 | 3 | 94255 | - | protein coding gene | B cell CLL/lymphoma 9 | |
Tssr34652 | 3 | 9 | - | TSS region | transcription start site region 34652 | |
Tssr34653 | 3 | 11 | - | TSS region | transcription start site region 34653 | |
Cpgi13585 | 3 | 1403 | CpG island | CpG island 13585 | ||
Tssr34654 | 3 | 38 | - | TSS region | transcription start site region 34654 | |
Tssr34655 | 3 | 3 | - | TSS region | transcription start site region 34655 | |
Gm42508 | 3 | 3291 | + | unclassified gene | predicted gene 42508 | |
9230110I02Rik | 3 | 991 | unclassified non-coding RNA gene | RIKEN cDNA 9230110I02 gene | ||
Gm43073 | 3 | 1188 | - | unclassified gene | predicted gene 43073 | |
D3Mit157 | 3 | 149 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 157 | ||
D3Mit157.2 | 3 | 116 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 157.2 | ||
Tssr34656 | 3 | 27 | - | TSS region | transcription start site region 34656 | |
Tssr34657 | 3 | 64 | - | TSS region | transcription start site region 34657 | |
Tssr34658 | 3 | 17 | - | TSS region | transcription start site region 34658 | |
Cpgi13586 | 3 | 252 | CpG island | CpG island 13586 | ||
Cpgi13587 | 3 | 209 | CpG island | CpG island 13587 | ||
Cpgi13588 | 3 | 243 | CpG island | CpG island 13588 | ||
Cpgi13589 | 3 | 289 | CpG island | CpG island 13589 | ||
Gm40101 | 3 | 2528 | + | lncRNA gene | predicted gene, 40101 | |
Cpgi13590 | 3 | 237 | CpG island | CpG island 13590 | ||
Olfr1402 | 3 | 962 | - | protein coding gene | olfactory receptor 1402 | |
Tssr34659 | 3 | 38 | - | TSS region | transcription start site region 34659 | |
Gm40102 | 3 | 26287 | + | lncRNA gene | predicted gene, 40102 | |
Chd1l | 3 | 49461 | - | protein coding gene | chromodomain helicase DNA binding protein 1-like | |
Cpgi13591 | 3 | 776 | CpG island | CpG island 13591 | ||
Gm43075 | 3 | 3904 | + | unclassified gene | predicted gene 43075 | |
Tssr34660 | 3 | 66 | - | TSS region | transcription start site region 34660 | |
Fmo5 | 3 | 26478 | + | protein coding gene | flavin containing monooxygenase 5 | |
Tssr30791 | 3 | 20 | + | TSS region | transcription start site region 30791 | |
Tssr30792 | 3 | 11 | + | TSS region | transcription start site region 30792 | |
Tssr30793 | 3 | 20 | + | TSS region | transcription start site region 30793 | |
Tssr30794 | 3 | 14 | + | TSS region | transcription start site region 30794 | |
Tssr30795 | 3 | 12 | + | TSS region | transcription start site region 30795 | |
Tssr30796 | 3 | 8 | + | TSS region | transcription start site region 30796 | |
Tssr30797 | 3 | 12 | + | TSS region | transcription start site region 30797 | |
Tssr974 | 3 | 31 | + | TSS region | transcription start site region 974 | |
Tssr30798 | 3 | 74 | + | TSS region | transcription start site region 30798 | |
Cpgi13592 | 3 | 1127 | CpG island | CpG island 13592 | ||
Prkab2 | 3 | 15600 | + | protein coding gene | protein kinase, AMP-activated, beta 2 non-catalytic subunit | |
Tssr30799 | 3 | 48 | + | TSS region | transcription start site region 30799 | |
Tssr30800 | 3 | 9 | + | TSS region | transcription start site region 30800 | |
Tssr30801 | 3 | 60 | + | TSS region | transcription start site region 30801 | |
Tssr30802 | 3 | 12 | + | TSS region | transcription start site region 30802 | |
gro57 | 3 | -19516100 | heritable phenotypic marker | growth/size 57 | ||
hem6 | 3 | -19516100 | heritable phenotypic marker | haematopoietic 6 |