Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96486390-96528780

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm25890	3	96486555 to 96486719	164	-	snRNA gene	predicted gene, 25890
Gm22614	3	96488729 to 96488893	164	+	snRNA gene	predicted gene, 22614
Cpgi13563	3	96497294 to 96497594	300		CpG island	CpG island 13563
n-TNgtt12	3	96497781 to 96497854	73	+	tRNA gene	nuclear encoded tRNA asparagine 12 (anticodon GTT)
n-TKctt16	3	96499512 to 96499584	72	-	tRNA gene	nuclear encoded tRNA lysine 16 (anticodon CTT)
Cpgi13564	3	96499723 to 96500593	870		CpG island	CpG island 13564
n-THgtg8	3	96500366 to 96500437	71	-	tRNA gene	nuclear encoded tRNA histidine 8 (anticodon GTG)
n-TGtcc7	3	96501009 to 96501080	71	-	tRNA gene	nuclear encoded tRNA glycine 7 (anticodon TCC)
n-TEctc13	3	96501447 to 96501518	71	-	tRNA gene	nuclear encoded tRNA glutamic acid 13 (anticodon CTC)
Gm40100	3	96506390 to 96508780	2390	-	lncRNA gene	predicted gene, 40100
Tssr30716	3	96520453 to 96520462	9	+	TSS region	transcription start site region 30716
Tssr30717	3	96525163 to 96525186	23	+	TSS region	transcription start site region 30717
Hjv	3	96525172 to 96529210	4038	+	protein coding gene	hemojuvelin BMP co-receptor
Tssr30718	3	96525192 to 96525219	27	+	TSS region	transcription start site region 30718
Cpgi13565	3	96526828 to 96527630	802		CpG island	CpG island 13565
Cpgi13566	3	96528302 to 96528589	287		CpG island	CpG island 13566
Tssr30719	3	96528612 to 96528614	2	+	TSS region	transcription start site region 30719