Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96424833-96525589

33 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
n-TKctt15	3	96428235 to 96428307	72	+	tRNA gene	nuclear encoded tRNA lysine 15 (anticodon CTT)
BC107364	3	96433788 to 96452306	18518	-	protein coding gene	cDNA sequence BC107364
Cpgi13560	3	96435651 to 96436195	544		CpG island	CpG island 13560
n-THgtg2	3	96435972 to 96436043	71	+	tRNA gene	nuclear encoded tRNA histidine 2 (anticodon GTG)
Gm26232	3	96450446 to 96450611	165	+	snRNA gene	predicted gene, 26232
n-TNgtt11	3	96451425 to 96451498	73	+	tRNA gene	nuclear encoded tRNA asparagine 11 (anticodon GTT)
n-THgtg7	3	96452495 to 96452566	71	+	tRNA gene	nuclear encoded tRNA histidine 7 (anticodon GTG)
Gm9207	3	96454835 to 96455949	1114	-	pseudogene	predicted gene 9207
n-THgtg9	3	96458070 to 96458141	71	-	tRNA gene	nuclear encoded tRNA histidine 9 (anticodon GTG)
Gm40099	3	96458995 to 96460336	1341	-	lncRNA gene	predicted gene, 40099
n-TNgtt13	3	96459138 to 96459211	73	-	tRNA gene	nuclear encoded tRNA asparagine 13 (anticodon GTT)
Rnu1b6	3	96460024 to 96460189	165	-	snRNA gene	U1b6 small nuclear RNA
Gm10685	3	96460186 to 96466925	6739	+	lincRNA gene	predicted gene 10685
Cpgi13561	3	96463902 to 96464297	395		CpG island	CpG island 13561
n-THgtg1	3	96463972 to 96464043	71	-	tRNA gene	nuclear encoded tRNA histidine 1 (anticodon GTG)
Gm43534	3	96464072 to 96466924	2852	-	unclassified gene	predicted gene 43534
Cpgi13562	3	96474833 to 96475589	756		CpG island	CpG island 13562
n-TQctg3	3	96479391 to 96479462	71	+	tRNA gene	nuclear encoded tRNA glutamine 3 (anticodon CTG)
Gm28001	3	96485161 to 96485277	116	+	rRNA gene	predicted gene, 28001
Gm25890	3	96486555 to 96486719	164	-	snRNA gene	predicted gene, 25890
Gm22614	3	96488729 to 96488893	164	+	snRNA gene	predicted gene, 22614
Cpgi13563	3	96497294 to 96497594	300		CpG island	CpG island 13563
n-TNgtt12	3	96497781 to 96497854	73	+	tRNA gene	nuclear encoded tRNA asparagine 12 (anticodon GTT)
n-TKctt16	3	96499512 to 96499584	72	-	tRNA gene	nuclear encoded tRNA lysine 16 (anticodon CTT)
Cpgi13564	3	96499723 to 96500593	870		CpG island	CpG island 13564
n-THgtg8	3	96500366 to 96500437	71	-	tRNA gene	nuclear encoded tRNA histidine 8 (anticodon GTG)
n-TGtcc7	3	96501009 to 96501080	71	-	tRNA gene	nuclear encoded tRNA glycine 7 (anticodon TCC)
n-TEctc13	3	96501447 to 96501518	71	-	tRNA gene	nuclear encoded tRNA glutamic acid 13 (anticodon CTC)
Gm40100	3	96506390 to 96508780	2390	-	lncRNA gene	predicted gene, 40100
Tssr30716	3	96520453 to 96520462	9	+	TSS region	transcription start site region 30716
Tssr30717	3	96525163 to 96525186	23	+	TSS region	transcription start site region 30717
Hjv	3	96525172 to 96529210	4038	+	protein coding gene	hemojuvelin BMP co-receptor
Tssr30718	3	96525192 to 96525219	27	+	TSS region	transcription start site region 30718