Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96394437-96434833

23 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
n-TQctg4	3	96399059 to 96399130	71	-	tRNA gene	nuclear encoded tRNA glutamine 4 (anticodon CTG)
4930477E14Rik	3	96401150 to 96402014	864	-	lincRNA gene	RIKEN cDNA 4930477E14 gene
Cpgi13556	3	96401679 to 96402441	762		CpG island	CpG island 13556
Tssr34622	3	96401995 to 96402005	10	-	TSS region	transcription start site region 34622
Tssr34623	3	96402010 to 96402017	7	-	TSS region	transcription start site region 34623
Tssr30713	3	96402096 to 96402110	14	+	TSS region	transcription start site region 30713
Tssr30714	3	96402118 to 96402121	3	+	TSS region	transcription start site region 30714
Tssr30715	3	96402124 to 96402136	12	+	TSS region	transcription start site region 30715
n-TNgtt10	3	96402218 to 96402291	73	+	tRNA gene	nuclear encoded tRNA asparagine 10 (anticodon GTT)
Gm26654	3	96402480 to 96402952	472	+	lincRNA gene	predicted gene, 26654
Cpgi13557	3	96404381 to 96404811	430		CpG island	CpG island 13557
Pafah1b1-ps1	3	96407517 to 96409059	1542	-	pseudogene	platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, pseudogene 1
Cpgi13558	3	96409327 to 96410262	935		CpG island	CpG island 13558
n-THgtg6	3	96410069 to 96410140	71	+	tRNA gene	nuclear encoded tRNA histidine 6 (anticodon GTG)
Gm21960	3	96412910 to 96413361	451	-	pseudogene	predicted gene, 21960
Cpgi13559	3	96414163 to 96414951	788		CpG island	CpG island 13559
Terc	3	96414437 to 96414833	396	-	telomerase RNA gene	telomerase RNA component
Tssr34624	3	96414825 to 96414839	14	-	TSS region	transcription start site region 34624
Tssr34625	3	96417732 to 96417759	27	-	TSS region	transcription start site region 34625
Gm24136	3	96422733 to 96422897	164	+	snRNA gene	predicted gene, 24136
n-TGccc6	3	96424033 to 96424103	70	-	tRNA gene	nuclear encoded tRNA glycine 6 (anticodon CCC)
n-TKctt15	3	96428235 to 96428307	72	+	tRNA gene	nuclear encoded tRNA lysine 15 (anticodon CTT)
BC107364	3	96433788 to 96452306	18518	-	protein coding gene	cDNA sequence BC107364