Gene symbol | Chromo- some |
Coordinates (bp, mm10) | Size (bp) | Strand | Feature Type | Gene name |
---|---|---|---|---|---|---|
n-TVcac10 | 3 | 72 | + | tRNA gene | nuclear encoded tRNA valine 10 (anticodon CAC) | |
Cpgi13552 | 3 | 289 | CpG island | CpG island 13552 | ||
Cpgi13553 | 3 | 742 | CpG island | CpG island 13553 | ||
n-TNgtt5 | 3 | 73 | - | tRNA gene | nuclear encoded tRNA asparagine 5 (anticodon GTT) | |
n-TNgtt1 | 3 | 73 | + | tRNA gene | nuclear encoded tRNA asparagine 1 (anticodon GTT) | |
n-TQctg5 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA glutamine 5 (anticodon CTG) | |
Cpgi13554 | 3 | 280 | CpG island | CpG island 13554 | ||
Platr30 | 3 | 13193 | + | lincRNA gene | pluripotency associated transcript 30 | |
n-TEttc3 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA glutamic acid 3 (anticodon TTC) | |
Gm26553 | 3 | 7564 | - | lincRNA gene | predicted gene, 26553 | |
n-TGccc5 | 3 | 70 | - | tRNA gene | nuclear encoded tRNA glycine 5 (anticodon CCC) | |
Rnu1b1 | 3 | 164 | - | snRNA gene | U1b1 small nuclear RNA | |
Rnu1b2 | 3 | 164 | + | snRNA gene | U1b2 small nuclear RNA | |
Gm17575 | 3 | 13218 | - | lincRNA gene | predicted gene, 17575 | |
Gm26689 | 3 | 7587 | + | lincRNA gene | predicted gene, 26689 | |
n-TGccc1 | 3 | 70 | + | tRNA gene | nuclear encoded tRNA glycine 1 (anticodon CCC) | |
n-TEttc2 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA glutamic acid 2 (anticodon TTC) | |
Cpgi13555 | 3 | 248 | CpG island | CpG island 13555 | ||
n-TQctg4 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA glutamine 4 (anticodon CTG) | |
4930477E14Rik | 3 | 864 | - | lincRNA gene | RIKEN cDNA 4930477E14 gene | |
Cpgi13556 | 3 | 762 | CpG island | CpG island 13556 | ||
Tssr34622 | 3 | 10 | - | TSS region | transcription start site region 34622 | |
Tssr34623 | 3 | 7 | - | TSS region | transcription start site region 34623 | |
Tssr30713 | 3 | 14 | + | TSS region | transcription start site region 30713 | |
Tssr30714 | 3 | 3 | + | TSS region | transcription start site region 30714 | |
Tssr30715 | 3 | 12 | + | TSS region | transcription start site region 30715 | |
n-TNgtt10 | 3 | 73 | + | tRNA gene | nuclear encoded tRNA asparagine 10 (anticodon GTT) | |
Gm26654 | 3 | 472 | + | lincRNA gene | predicted gene, 26654 | |
Cpgi13557 | 3 | 430 | CpG island | CpG island 13557 | ||
Pafah1b1-ps1 | 3 | 1542 | - | pseudogene | platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, pseudogene 1 | |
Cpgi13558 | 3 | 935 | CpG island | CpG island 13558 | ||
n-THgtg6 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA histidine 6 (anticodon GTG) | |
Gm21960 | 3 | 451 | - | pseudogene | predicted gene, 21960 | |
Cpgi13559 | 3 | 788 | CpG island | CpG island 13559 | ||
Terc | 3 | 396 | - | telomerase RNA gene | telomerase RNA component | |
Tssr34624 | 3 | 14 | - | TSS region | transcription start site region 34624 | |
Tssr34625 | 3 | 27 | - | TSS region | transcription start site region 34625 | |
Gm24136 | 3 | 164 | + | snRNA gene | predicted gene, 24136 | |
n-TGccc6 | 3 | 70 | - | tRNA gene | nuclear encoded tRNA glycine 6 (anticodon CCC) | |
n-TKctt15 | 3 | 72 | + | tRNA gene | nuclear encoded tRNA lysine 15 (anticodon CTT) | |
BC107364 | 3 | 18518 | - | protein coding gene | cDNA sequence BC107364 | |
Cpgi13560 | 3 | 544 | CpG island | CpG island 13560 | ||
n-THgtg2 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA histidine 2 (anticodon GTG) | |
Gm26232 | 3 | 165 | + | snRNA gene | predicted gene, 26232 | |
n-TNgtt11 | 3 | 73 | + | tRNA gene | nuclear encoded tRNA asparagine 11 (anticodon GTT) | |
n-THgtg7 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA histidine 7 (anticodon GTG) | |
Gm9207 | 3 | 1114 | - | pseudogene | predicted gene 9207 | |
n-THgtg9 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA histidine 9 (anticodon GTG) | |
Gm40099 | 3 | 1341 | - | lncRNA gene | predicted gene, 40099 | |
n-TNgtt13 | 3 | 73 | - | tRNA gene | nuclear encoded tRNA asparagine 13 (anticodon GTT) | |
Rnu1b6 | 3 | 165 | - | snRNA gene | U1b6 small nuclear RNA | |
Gm10685 | 3 | 6739 | + | lincRNA gene | predicted gene 10685 | |
Cpgi13561 | 3 | 395 | CpG island | CpG island 13561 | ||
n-THgtg1 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA histidine 1 (anticodon GTG) | |
Gm43534 | 3 | 2852 | - | unclassified gene | predicted gene 43534 | |
Cpgi13562 | 3 | 756 | CpG island | CpG island 13562 | ||
n-TQctg3 | 3 | 71 | + | tRNA gene | nuclear encoded tRNA glutamine 3 (anticodon CTG) | |
Gm28001 | 3 | 116 | + | rRNA gene | predicted gene, 28001 | |
Gm25890 | 3 | 164 | - | snRNA gene | predicted gene, 25890 | |
Gm22614 | 3 | 164 | + | snRNA gene | predicted gene, 22614 | |
Cpgi13563 | 3 | 300 | CpG island | CpG island 13563 | ||
n-TNgtt12 | 3 | 73 | + | tRNA gene | nuclear encoded tRNA asparagine 12 (anticodon GTT) | |
n-TKctt16 | 3 | 72 | - | tRNA gene | nuclear encoded tRNA lysine 16 (anticodon CTT) | |
Cpgi13564 | 3 | 870 | CpG island | CpG island 13564 | ||
n-THgtg8 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA histidine 8 (anticodon GTG) | |
n-TGtcc7 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA glycine 7 (anticodon TCC) | |
n-TEctc13 | 3 | 71 | - | tRNA gene | nuclear encoded tRNA glutamic acid 13 (anticodon CTC) | |
Gm40100 | 3 | 2390 | - | lncRNA gene | predicted gene, 40100 | |
Tssr30716 | 3 | 9 | + | TSS region | transcription start site region 30716 | |
Tssr30717 | 3 | 23 | + | TSS region | transcription start site region 30717 | |
Hjv | 3 | 4038 | + | protein coding gene | hemojuvelin BMP co-receptor | |
Tssr30718 | 3 | 27 | + | TSS region | transcription start site region 30718 | |
Cpgi13565 | 3 | 802 | CpG island | CpG island 13565 | ||
Cpgi13566 | 3 | 287 | CpG island | CpG island 13566 | ||
Tssr30719 | 3 | 2 | + | TSS region | transcription start site region 30719 | |
Gm15441 | 3 | 11033 | - | antisense lncRNA gene | predicted gene 15441 | |
Tssr34626 | 3 | 7 | - | TSS region | transcription start site region 34626 | |
Cpgi13567 | 3 | 367 | CpG island | CpG island 13567 | ||
Tssr34627 | 3 | 60 | - | TSS region | transcription start site region 34627 | |
Tssr34628 | 3 | 13 | - | TSS region | transcription start site region 34628 | |
Tssr30720 | 3 | 18 | + | TSS region | transcription start site region 30720 | |
Txnip | 3 | 3900 | + | protein coding gene | thioredoxin interacting protein | |
Tssr30721 | 3 | 4 | + | TSS region | transcription start site region 30721 | |
Tssr30722 | 3 | 30 | + | TSS region | transcription start site region 30722 | |
Tssr30723 | 3 | 10 | + | TSS region | transcription start site region 30723 | |
Tssr30724 | 3 | 13 | + | TSS region | transcription start site region 30724 | |
Tssr30725 | 3 | 49 | + | TSS region | transcription start site region 30725 | |
Tssr30726 | 3 | 14 | + | TSS region | transcription start site region 30726 | |
Tssr30727 | 3 | 13 | + | TSS region | transcription start site region 30727 | |
Tssr30728 | 3 | 37 | + | TSS region | transcription start site region 30728 | |
Tssr30729 | 3 | 21 | + | TSS region | transcription start site region 30729 | |
Tssr30730 | 3 | 13 | + | TSS region | transcription start site region 30730 | |
Tssr30731 | 3 | 21 | + | TSS region | transcription start site region 30731 | |
Tssr30732 | 3 | 22 | + | TSS region | transcription start site region 30732 | |
Tssr30733 | 3 | 16 | + | TSS region | transcription start site region 30733 | |
Cpgi13568 | 3 | 395 | CpG island | CpG island 13568 | ||
Cpgi13569 | 3 | 164 | CpG island | CpG island 13569 | ||
Tssr30734 | 3 | 14 | + | TSS region | transcription start site region 30734 | |
Gm16253 | 3 | 3679 | + | protein coding gene | predicted gene 16253 | |
Tssr30735 | 3 | 17 | + | TSS region | transcription start site region 30735 | |
Polr3gl | 3 | 16309 | - | protein coding gene | polymerase (RNA) III (DNA directed) polypeptide G like | |
Tssr34629 | 3 | 29 | - | TSS region | transcription start site region 34629 | |
Tssr34630 | 3 | 24 | - | TSS region | transcription start site region 34630 | |
Tssr34631 | 3 | 11 | - | TSS region | transcription start site region 34631 | |
Tssr34632 | 3 | 16 | - | TSS region | transcription start site region 34632 | |
Tssr34633 | 3 | 18 | - | TSS region | transcription start site region 34633 | |
Cpgi13570 | 3 | 212 | CpG island | CpG island 13570 | ||
Tssr34634 | 3 | 4 | - | TSS region | transcription start site region 34634 | |
Tssr34635 | 3 | 49 | - | TSS region | transcription start site region 34635 | |
Cpgi13571 | 3 | 516 | CpG island | CpG island 13571 | ||
Tssr34636 | 3 | 48 | - | TSS region | transcription start site region 34636 | |
Tssr30736 | 3 | 16 | + | TSS region | transcription start site region 30736 | |
Tssr30737 | 3 | 13 | + | TSS region | transcription start site region 30737 | |
Tssr30738 | 3 | 34 | + | TSS region | transcription start site region 30738 | |
Ankrd34a | 3 | 3139 | + | protein coding gene | ankyrin repeat domain 34A | |
Tssr30739 | 3 | 11 | + | TSS region | transcription start site region 30739 | |
Cpgi13572 | 3 | 1780 | CpG island | CpG island 13572 | ||
Cpgi13573 | 3 | 815 | CpG island | CpG island 13573 | ||
Tssr30740 | 3 | 55 | + | TSS region | transcription start site region 30740 | |
Lix1l | 3 | 24219 | + | protein coding gene | Lix1-like | |
6330549D23Rik | 3 | 23157 | - | pseudogene | RIKEN cDNA 6330549D23 gene | |
Tssr30741 | 3 | 31 | + | TSS region | transcription start site region 30741 | |
Cpgi13574 | 3 | 461 | CpG island | CpG island 13574 | ||
Tssr34637 | 3 | 40 | - | TSS region | transcription start site region 34637 | |
Tssr30742 | 3 | 26 | + | TSS region | transcription start site region 30742 | |
Tssr30743 | 3 | 36 | + | TSS region | transcription start site region 30743 | |
Rbm8a | 3 | 3858 | + | protein coding gene | RNA binding motif protein 8a | |
Tssr30744 | 3 | 32 | + | TSS region | transcription start site region 30744 | |
Cpgi13575 | 3 | 927 | CpG island | CpG island 13575 | ||
Pex11b | 3 | 9990 | + | protein coding gene | peroxisomal biogenesis factor 11 beta | |
Tssr30745 | 3 | 13 | + | TSS region | transcription start site region 30745 | |
Gm42957 | 3 | 17627 | + | protein coding gene | predicted gene 42957 | |
Tssr30746 | 3 | 69 | + | TSS region | transcription start site region 30746 | |
Tssr30747 | 3 | 20 | + | TSS region | transcription start site region 30747 | |
Tssr30748 | 3 | 28 | + | TSS region | transcription start site region 30748 | |
Eae3 | 3 | 107 | QTL | experimental allergic encephalomyelitis susceptibility 3 | ||
D3Mit101 | 3 | 107 | DNA segment | DNA segment, Chr 3, Massachusetts Institute of Technology 101 | ||
Tssr30749 | 3 | 2 | + | TSS region | transcription start site region 30749 | |
Tssr30750 | 3 | 29 | + | TSS region | transcription start site region 30750 | |
Itga10 | 3 | 18935 | + | protein coding gene | integrin, alpha 10 | |
Rpl21-ps11 | 3 | 479 | - | pseudogene | ribosomal protein L21, pseudogene 11 | |
Tssr34638 | 3 | 10 | - | TSS region | transcription start site region 34638 | |
Cpgi13576 | 3 | 533 | CpG island | CpG island 13576 | ||
Ankrd35 | 3 | 20901 | + | protein coding gene | ankyrin repeat domain 35 | |
Tssr30751 | 3 | 48 | + | TSS region | transcription start site region 30751 | |
Tssr30752 | 3 | 13 | + | TSS region | transcription start site region 30752 | |
Cpgi13577 | 3 | 603 | CpG island | CpG island 13577 | ||
C230057H02Rik | 3 | 3153 | unclassified gene | RIKEN cDNA C230057H02 gene | ||
Cpgi13578 | 3 | 1388 | CpG island | CpG island 13578 | ||
Tssr30753 | 3 | 17 | + | TSS region | transcription start site region 30753 | |
Pias3 | 3 | 9686 | + | protein coding gene | protein inhibitor of activated STAT 3 | |
Tssr30754 | 3 | 77 | + | TSS region | transcription start site region 30754 | |
Tssr30755 | 3 | 14 | + | TSS region | transcription start site region 30755 | |
Tssr30756 | 3 | 65 | + | TSS region | transcription start site region 30756 | |
Tssr30757 | 3 | 16 | + | TSS region | transcription start site region 30757 | |
Tssr30758 | 3 | 2 | + | TSS region | transcription start site region 30758 | |
Nudt17 | 3 | 2495 | - | protein coding gene | nudix (nucleoside diphosphate linked moiety X)-type motif 17 | |
Cpgi13579 | 3 | 468 | CpG island | CpG island 13579 | ||
Tssr34639 | 3 | 29 | - | TSS region | transcription start site region 34639 | |
Polr3c | 3 | 15975 | - | protein coding gene | polymerase (RNA) III (DNA directed) polypeptide C | |
Cpgi13580 | 3 | 269 | CpG island | CpG island 13580 | ||
Gm22581 | 3 | 135 | - | snoRNA gene | predicted gene, 22581 | |
Gm42783 | 3 | 794 | - | unclassified gene | predicted gene 42783 | |
Cpgi13581 | 3 | 1091 | CpG island | CpG island 13581 | ||
Tssr34640 | 3 | 16 | - | TSS region | transcription start site region 34640 | |
Tssr34641 | 3 | 52 | - | TSS region | transcription start site region 34641 | |
Tssr30759 | 3 | 41 | + | TSS region | transcription start site region 30759 | |
Tssr34642 | 3 | 7 | - | TSS region | transcription start site region 34642 | |
Tssr30760 | 3 | 28 | + | TSS region | transcription start site region 30760 | |
Rnf115 | 3 | 63570 | + | protein coding gene | ring finger protein 115 | |
Tssr30761 | 3 | 7 | + | TSS region | transcription start site region 30761 | |
Tssr30762 | 3 | 67 | + | TSS region | transcription start site region 30762 | |
Tssr30763 | 3 | 27 | + | TSS region | transcription start site region 30763 | |
Tssr30764 | 3 | 4 | + | TSS region | transcription start site region 30764 | |
Tssr30765 | 3 | 8 | + | TSS region | transcription start site region 30765 | |
Tssr30766 | 3 | 46 | + | TSS region | transcription start site region 30766 | |
Tssr30767 | 3 | 11 | + | TSS region | transcription start site region 30767 | |
Tssr30768 | 3 | 37 | + | TSS region | transcription start site region 30768 | |
Gm42782 | 3 | 521 | + | unclassified gene | predicted gene 42782 | |
Tssr30769 | 3 | 13 | + | TSS region | transcription start site region 30769 | |
Cd160 | 3 | 30588 | - | protein coding gene | CD160 antigen | |
Tssr34643 | 3 | 14 | - | TSS region | transcription start site region 34643 | |
Tssr973 | 3 | 5 | + | TSS region | transcription start site region 973 | |
Tssr30770 | 3 | 19 | + | TSS region | transcription start site region 30770 | |
Pdzk1 | 3 | 41542 | + | protein coding gene | PDZ domain containing 1 | |
Tssr30771 | 3 | 8 | + | TSS region | transcription start site region 30771 | |
Tssr30772 | 3 | 15 | + | TSS region | transcription start site region 30772 | |
Tssr30773 | 3 | 8 | + | TSS region | transcription start site region 30773 | |
4930442L01Rik | 3 | 2244 | - | antisense lncRNA gene | RIKEN cDNA 4930442L01 gene | |
gro57 | 3 | -19516100 | heritable phenotypic marker | growth/size 57 | ||
hem6 | 3 | -19516100 | heritable phenotypic marker | haematopoietic 6 |