Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96289615-96379688

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fcgr1 3 96282909 to 96293969 11060 - protein coding gene Fc receptor, IgG, high affinity I
Tssr34617 3 96290185 to 96290195 10 - TSS region transcription start site region 34617
Tssr34618 3 96290211 to 96290224 13 - TSS region transcription start site region 34618
Tssr34619 3 96292416 to 96292429 13 - TSS region transcription start site region 34619
Tssr34620 3 96293953 to 96293985 32 - TSS region transcription start site region 34620
Tssr34621 3 96293996 to 96294001 5 - TSS region transcription start site region 34621
n-TGccc2 3 96311254 to 96311324 70 + tRNA gene nuclear encoded tRNA glycine 2 (anticodon CCC)
n-TNgtt4 3 96322074 to 96322147 73 + tRNA gene nuclear encoded tRNA asparagine 4 (anticodon GTT)
Gm24830 3 96328425 to 96328590 165 + snRNA gene predicted gene, 24830
n-TVcac10 3 96332740 to 96332812 72 + tRNA gene nuclear encoded tRNA valine 10 (anticodon CAC)
Cpgi13552 3 96333063 to 96333352 289 CpG island CpG island 13552
Cpgi13553 3 96334014 to 96334756 742 CpG island CpG island 13553
n-TNgtt5 3 96334615 to 96334688 73 - tRNA gene nuclear encoded tRNA asparagine 5 (anticodon GTT)
n-TNgtt1 3 96334971 to 96335044 73 + tRNA gene nuclear encoded tRNA asparagine 1 (anticodon GTT)
n-TQctg5 3 96341156 to 96341227 71 - tRNA gene nuclear encoded tRNA glutamine 5 (anticodon CTG)
Cpgi13554 3 96343500 to 96343780 280 CpG island CpG island 13554
Platr30 3 96345287 to 96358480 13193 + lincRNA gene pluripotency associated transcript 30
n-TEttc3 3 96346675 to 96346746 71 + tRNA gene nuclear encoded tRNA glutamic acid 3 (anticodon TTC)
Gm26553 3 96349587 to 96357151 7564 - lincRNA gene predicted gene, 26553
n-TGccc5 3 96351167 to 96351237 70 - tRNA gene nuclear encoded tRNA glycine 5 (anticodon CCC)
Rnu1b1 3 96359953 to 96360117 164 - snRNA gene U1b1 small nuclear RNA
Rnu1b2 3 96374021 to 96374185 164 + snRNA gene U1b2 small nuclear RNA
Gm17575 3 96375646 to 96388864 13218 - lincRNA gene predicted gene, 17575
Gm26689 3 96376976 to 96384563 7587 + lincRNA gene predicted gene, 26689