Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96262909-96313969

29 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi13546	3	96262772 to 96263418	646		CpG island	CpG island 13546
Hist2h4	3	96262934 to 96263317	383	-	protein coding gene	histone cluster 2, H4
Tssr34612	3	96263325 to 96263340	15	-	TSS region	transcription start site region 34612
Tssr30709	3	96263719 to 96263729	10	+	TSS region	transcription start site region 30709
Cpgi13547	3	96263728 to 96264004	276		CpG island	CpG island 13547
Gm38227	3	96263785 to 96265386	1601	+	unclassified gene	predicted gene, 38227
Gm20628	3	96267075 to 96270289	3214	-	antisense lncRNA gene	predicted gene 20628
Cpgi13548	3	96268541 to 96268693	152		CpG island	CpG island 13548
Hist2h3b	3	96268654 to 96269141	487	+	protein coding gene	histone cluster 2, H3b
Tssr30710	3	96268671 to 96268683	12	+	TSS region	transcription start site region 30710
Cpgi13549	3	96269088 to 96269410	322		CpG island	CpG island 13549
Tssr34613	3	96269435 to 96269473	38	-	TSS region	transcription start site region 34613
Cpgi13550	3	96269573 to 96270281	708		CpG island	CpG island 13550
Tssr30711	3	96269695 to 96269703	8	+	TSS region	transcription start site region 30711
Gm42743	3	96269721 to 96279001	9280	+	lincRNA gene	predicted gene 42743
Hist2h2bb	3	96269752 to 96270132	380	+	protein coding gene	histone cluster 2, H2bb
Tssr30712	3	96275027 to 96275032	5	+	TSS region	transcription start site region 30712
Cpgi13551	3	96277749 to 96278537	788		CpG island	CpG island 13551
Fcgr1	3	96282909 to 96293969	11060	-	protein coding gene	Fc receptor, IgG, high affinity I
Tssr34614	3	96283830 to 96283849	19	-	TSS region	transcription start site region 34614
D3Nds11	3	96284431 to 96284619	188		DNA segment	DNA segment, Chr 3, Nuffield Department of Surgery 11
Tssr34615	3	96285978 to 96285992	14	-	TSS region	transcription start site region 34615
Tssr34616	3	96287201 to 96287229	28	-	TSS region	transcription start site region 34616
Tssr34617	3	96290185 to 96290195	10	-	TSS region	transcription start site region 34617
Tssr34618	3	96290211 to 96290224	13	-	TSS region	transcription start site region 34618
Tssr34619	3	96292416 to 96292429	13	-	TSS region	transcription start site region 34619
Tssr34620	3	96293953 to 96293985	32	-	TSS region	transcription start site region 34620
Tssr34621	3	96293996 to 96294001	5	-	TSS region	transcription start site region 34621
n-TGccc2	3	96311254 to 96311324	70	+	tRNA gene	nuclear encoded tRNA glycine 2 (anticodon CCC)