Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96235554-96258509

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23 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13543 3 96238220 to 96238474 254 CpG island CpG island 13543
Hist2h3c2 3 96238479 to 96239127 648 - protein coding gene histone cluster 2, H3c2
Tssr34598 3 96238981 to 96238985 4 - TSS region transcription start site region 34598
Gm20632 3 96239393 to 96241819 2426 + antisense lncRNA gene predicted gene 20632
Hist2h2aa2 3 96239749 to 96240276 527 - protein coding gene histone cluster 2, H2aa2
Gm47311 3 96239868 to 96240005 137 + miRNA gene predicted gene, 47311
Cpgi13544 3 96240281 to 96240610 329 CpG island CpG island 13544
Tssr34599 3 96240317 to 96240338 21 - TSS region transcription start site region 34599
Gm20633 3 96243550 to 96246380 2830 - antisense lncRNA gene predicted gene 20633
Cpgi13545 3 96245071 to 96245547 476 CpG island CpG island 13545
Tssr34600 3 96245217 to 96245222 5 - TSS region transcription start site region 34600
Tssr34601 3 96245306 to 96245318 12 - TSS region transcription start site region 34601
Hist2h2aa1 3 96245497 to 96246052 555 + protein coding gene histone cluster 2, H2aa1
Tssr30705 3 96245530 to 96245546 16 + TSS region transcription start site region 30705
Gm20634 3 96245554 to 96248509 2955 + unclassified non-coding RNA gene predicted gene 20634
Gm47313 3 96245826 to 96245963 137 - miRNA gene predicted gene, 47313
Hist2h3c1 3 96246685 to 96247348 663 + protein coding gene histone cluster 2, H3c1
Tssr30706 3 96246836 to 96246850 14 + TSS region transcription start site region 30706
Tssr30707 3 96247830 to 96247874 44 + TSS region transcription start site region 30707
Gm20627 3 96254619 to 96256277 1658 - lncRNA gene predicted gene 20627
Tssr34602 3 96256244 to 96256255 11 - TSS region transcription start site region 34602
Tssr34603 3 96256261 to 96256268 7 - TSS region transcription start site region 34603
Tssr34604 3 96256271 to 96256307 36 - TSS region transcription start site region 34604