Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:9617479-9903679

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr32582 3 9623519 to 9623528 9 - TSS region transcription start site region 32582
Cpgi12975 3 9629957 to 9630108 151 CpG island CpG island 12975
Gm33169 3 9646323 to 9663118 16795 - lncRNA gene predicted gene, 33169
Gm17806 3 9656520 to 9656902 382 + pseudogene predicted gene, 17806
Tssr28348 3 9658352 to 9658359 7 + TSS region transcription start site region 28348
Tssr28349 3 9658371 to 9658378 7 + TSS region transcription start site region 28349
D3Mit202 3 9669772 to 9669910 138 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 202
Pag1 3 9687479 to 9833679 146200 - protein coding gene phosphoprotein associated with glycosphingolipid microdomains 1
Tssr32583 3 9705000 to 9705004 4 - TSS region transcription start site region 32583
Gm16337 3 9757607 to 9786142 28535 + lincRNA gene predicted gene 16337
Tssr32584 3 9761153 to 9761156 3 - TSS region transcription start site region 32584
Tssr32585 3 9778793 to 9778804 11 - TSS region transcription start site region 32585
Tssr32586 3 9786518 to 9786526 8 - TSS region transcription start site region 32586
Tssr32587 3 9799352 to 9799376 24 - TSS region transcription start site region 32587
Tssr32588 3 9801594 to 9801597 3 - TSS region transcription start site region 32588
Tssr815 3 9801763 to 9801797 34 - TSS region transcription start site region 815
Tssr28350 3 9801887 to 9801931 44 + TSS region transcription start site region 28350
Gm24786 3 9829620 to 9829728 108 - rRNA gene predicted gene, 24786
Cpgi12976 3 9832798 to 9834242 1444 CpG island CpG island 12976
Tssr32589 3 9833596 to 9833611 15 - TSS region transcription start site region 32589
Tssr32590 3 9833617 to 9833638 21 - TSS region transcription start site region 32590
Tssr32591 3 9833653 to 9833668 15 - TSS region transcription start site region 32591
Tssr32592 3 9853122 to 9853134 12 - TSS region transcription start site region 32592
Tssr28351 3 9853227 to 9853238 11 + TSS region transcription start site region 28351
Tssr28352 3 9853248 to 9853282 34 + TSS region transcription start site region 28352
Tssr816 3 9853293 to 9853300 7 + TSS region transcription start site region 816
Tssr32593 3 9879487 to 9879528 41 - TSS region transcription start site region 32593
Gm33273 3 9880628 to 9885288 4660 - lncRNA gene predicted gene, 33273
Tssr32594 3 9884724 to 9884741 17 - TSS region transcription start site region 32594
Tssr32595 3 9886698 to 9886712 14 - TSS region transcription start site region 32595
Tssr32596 3 9886725 to 9886732 7 - TSS region transcription start site region 32596
Tssr28353 3 9886942 to 9886952 10 + TSS region transcription start site region 28353
Tssr28354 3 9886977 to 9886988 11 + TSS region transcription start site region 28354
Tssr817 3 9887460 to 9887466 6 + TSS region transcription start site region 817
Tssr818 3 9890838 to 9890880 42 - TSS region transcription start site region 818
Gm6236 3 9899433 to 9902377 2944 + pseudogene predicted gene 6236