Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:96043569-96173586

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Vps45 3 95999832 to 96058455 58623 - protein coding gene vacuolar protein sorting 45
Cpgi13534 3 96057754 to 96058192 438 CpG island CpG island 13534
Tssr34589 3 96057823 to 96057874 51 - TSS region transcription start site region 34589
Tssr34590 3 96058446 to 96058459 13 - TSS region transcription start site region 34590
Tssr30677 3 96086690 to 96086735 45 + TSS region transcription start site region 30677
Gm43554 3 96086871 to 96087056 185 + pseudogene predicted gene 43554
Tssr34591 3 96094297 to 96094332 35 - TSS region transcription start site region 34591
Gm30044 3 96098167 to 96104358 6191 - lncRNA gene predicted gene, 30044
Cpgi13535 3 96104178 to 96105107 929 CpG island CpG island 13535
Tssr30678 3 96104478 to 96104489 11 + TSS region transcription start site region 30678
Tssr30679 3 96104498 to 96104571 73 + TSS region transcription start site region 30679
Otud7b 3 96104527 to 96161129 56602 + protein coding gene OTU domain containing 7B
Tssr30680 3 96104816 to 96104827 11 + TSS region transcription start site region 30680
Tssr30681 3 96108521 to 96108531 10 + TSS region transcription start site region 30681
Tssr30682 3 96108534 to 96108566 32 + TSS region transcription start site region 30682
Tssr30683 3 96108569 to 96108586 17 + TSS region transcription start site region 30683
Tssr30684 3 96108588 to 96108612 24 + TSS region transcription start site region 30684
Cpgi13536 3 96161344 to 96161533 189 CpG island CpG island 13536
Tssr30685 3 96161956 to 96161977 21 + TSS region transcription start site region 30685
Tssr30686 3 96161981 to 96162023 42 + TSS region transcription start site region 30686
Mtmr11 3 96162004 to 96171718 9714 + protein coding gene myotubularin related protein 11
Tssr30687 3 96162049 to 96162063 14 + TSS region transcription start site region 30687
Tssr30688 3 96162447 to 96162477 30 + TSS region transcription start site region 30688
Gm17690 3 96167464 to 96172416 4952 - antisense lncRNA gene predicted gene, 17690
Cpgi13537 3 96172026 to 96173183 1157 CpG island CpG island 13537
Tssr30689 3 96172327 to 96172338 11 + TSS region transcription start site region 30689
Tssr30690 3 96172352 to 96172368 16 + TSS region transcription start site region 30690
Tssr34592 3 96172384 to 96172462 78 - TSS region transcription start site region 34592
Sf3b4 3 96172506 to 96177564 5058 + protein coding gene splicing factor 3b, subunit 4
Tssr30691 3 96172507 to 96172530 23 + TSS region transcription start site region 30691
Tssr30692 3 96172534 to 96172564 30 + TSS region transcription start site region 30692