Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:95753747-95883801

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tars2 3 95739974 to 95754977 15003 - protein coding gene threonyl-tRNA synthetase 2, mitochondrial (putative)
Cpgi13520 3 95754626 to 95754984 358 CpG island CpG island 13520
Tssr34539 3 95754796 to 95754803 7 - TSS region transcription start site region 34539
Tssr34540 3 95754824 to 95754831 7 - TSS region transcription start site region 34540
Tssr34541 3 95754841 to 95754887 46 - TSS region transcription start site region 34541
Rprd2 3 95760341 to 95818863 58522 - protein coding gene regulation of nuclear pre-mRNA domain containing 2
Tssr34542 3 95761881 to 95761886 5 - TSS region transcription start site region 34542
Gm43436 3 95780724 to 95780870 146 + pseudogene predicted gene 43436
Gm26361 3 95796699 to 95796884 185 - snRNA gene predicted gene, 26361
Gm17815 3 95804855 to 95805749 894 + pseudogene predicted gene, 17815
Cpgi13521 3 95818197 to 95820031 1834 CpG island CpG island 13521
Tssr34543 3 95818747 to 95818801 54 - TSS region transcription start site region 34543
Tssr34544 3 95818821 to 95818877 56 - TSS region transcription start site region 34544
Tssr34545 3 95818895 to 95818907 12 - TSS region transcription start site region 34545
Tssr34546 3 95818941 to 95818990 49 - TSS region transcription start site region 34546
Gm29948 3 95819047 to 95821901 2854 + lncRNA gene predicted gene, 29948
Tssr34547 3 95819058 to 95819075 17 - TSS region transcription start site region 34547
Tssr34548 3 95819211 to 95819247 36 - TSS region transcription start site region 34548
Tssr30646 3 95819319 to 95819322 3 + TSS region transcription start site region 30646
Tssr34549 3 95819346 to 95819380 34 - TSS region transcription start site region 34549
Prpf3 3 95830124 to 95855885 25761 - protein coding gene pre-mRNA processing factor 3
Cpgi13522 3 95855420 to 95856120 700 CpG island CpG island 13522
Tssr34550 3 95855777 to 95855822 45 - TSS region transcription start site region 34550
Tssr34551 3 95855860 to 95855889 29 - TSS region transcription start site region 34551
Gm26594 3 95855966 to 95861485 5519 + lincRNA gene predicted gene, 26594
Mrps21 3 95862634 to 95871519 8885 - protein coding gene mitochondrial ribosomal protein S21
Cpgi13523 3 95865601 to 95865896 295 CpG island CpG island 13523
Cpgi13524 3 95871300 to 95871770 470 CpG island CpG island 13524
Tssr34552 3 95871470 to 95871511 41 - TSS region transcription start site region 34552
Tssr30647 3 95871519 to 95871580 61 + TSS region transcription start site region 30647
C920021L13Rik 3 95871522 to 95889093 17571 + antisense lncRNA gene RIKEN cDNA C920021L13 gene
Tssr30648 3 95871585 to 95871635 50 + TSS region transcription start site region 30648
Tssr30649 3 95877053 to 95877059 6 + TSS region transcription start site region 30649
Ciart 3 95878500 to 95882242 3742 - protein coding gene circadian associated repressor of transcription
Cpgi13525 3 95881857 to 95882994 1137 CpG island CpG island 13525
Tssr34553 3 95882031 to 95882047 16 - TSS region transcription start site region 34553
Tssr34554 3 95882181 to 95882190 9 - TSS region transcription start site region 34554
Tssr34555 3 95882193 to 95882231 38 - TSS region transcription start site region 34555
Tssr34556 3 95882232 to 95882244 12 - TSS region transcription start site region 34556
Tssr30650 3 95882570 to 95882575 5 + TSS region transcription start site region 30650
Tssr30651 3 95882727 to 95882740 13 + TSS region transcription start site region 30651
Tssr30652 3 95882753 to 95882777 24 + TSS region transcription start site region 30652